PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00303g08001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family GeBP
Protein Properties Length: 327aa    MW: 37051.9 Da    PI: 9.1776
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00303g08001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573106.81.6e-33137228297
                    DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdq 86 
                               lf+rlwse+Dei++L G+id++ +++++p+ d ++f ef+k+s++++vsk+ql +Kir+LKkK++++v+k    k+++fs +h+q
  Peinf101Scf00303g08001.1 137 LFERLWSENDEIAILNGMIDYRLQKKSDPVPDFNKFREFIKNSLQVDVSKTQLQDKIRKLKKKYENHVAK----KNKVFSIPHQQ 217
                               799*******************************************************************....8899******* PP

                    DUF573  87 kifelskkiWg 97 
                               k+++lskkiWg
  Peinf101Scf00303g08001.1 218 KTYDLSKKIWG 228
                               **********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.9E-30138228IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MYTASPLSQW LSLFKMAEKN QHEQDSGEKA SSESEQHPKK QPVSDPKKTP PQDSSSSKEE  60
SESESQSDSL SGCATQEPNT KPMHNPQKSV PKPNSGVGAK RPAEAEAEDG EAKKSRSSKK  120
IPEKKSETTN EGAKRQLFER LWSENDEIAI LNGMIDYRLQ KKSDPVPDFN KFREFIKNSL  180
QVDVSKTQLQ DKIRKLKKKY ENHVAKKNKV FSIPHQQKTY DLSKKIWGNK VEEVVIENNG  240
SKKNGESMSE VKDNGVFDFL VSCGTDVDAM EKLLEKNYVL IGVEKRNEMK RKLTSLKFAE  300
MDLCVMRSKL TYELVSLITD AMKALEN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016508976.12e-77PREDICTED: mediator-associated protein 1-like
TrEMBLA0A1S4D6K14e-76A0A1S4D6K1_TOBAC; mediator-associated protein 1-like
STRINGXP_009799939.11e-76(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.16e-26DNA-binding storekeeper protein-related transcriptional regulator