PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00276g07007.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

GeBP

Protein Properties

Length: 320aa MW: 37509.3 Da PI: 4.0646

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00276g07007.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	38.6	2.9e-12	196	290	4	97
DUF573 4 qrlwseeD..eivlLqGlidfkaktgkspsddidafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehd 85 q ++ ++D ++++L+ l f ++g ps +++++ +k+si ++k+ ++l++K+ L ++fk+ ++ +g++p++ ++ d Peinf101Scf00276g07007.1 196 QEMYDDDDdqDLAILKSLSYFYYSNGYVPSPSSNELHKHIKDSIpNLKIRGEELINKVFTLEDQFKTVREL--DGDNPDMPRPVD 278 566666663369******************************5589*****************99..******** PP DUF573 86 qkifelskkiWg 97 ++if+ls++iWg Peinf101Scf00276g07007.1 279 REIFKLSMSIWG 290 *********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	6.1E-9	204	290	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence Send to blast
MTRIYKIEEE VPAFDLERAL TCIKLIEEQV QGQEVVITDA SFTNSTRNEI EEKEQGQNER 60 IDDYGNQETE QRETRDQESD HNEDEERNQE NKNDQQEHRD INAEVESHDN NQSSENGNQE 120 SEQNERNEDE NQKDEDEAED EEDEKRKVIA KGKRSMSEIC KLTFMVTKFS SLQKGETSYK 180 AEEEAKNSPP EEELNQEMYD DDDDQDLAIL KSLSYFYYSN GYVPSPSSNE LHKHIKDSIP 240 NLKIRGEELI NKVFTLEDQF KTVRELDGDN PDMPRPVDRE IFKLSMSIWG NSEDNVEHNQ 300 GAYDENIQYQ ALTYFLKDFL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016453452.1	2e-59	PREDICTED: protein PFC0760c-like
TrEMBL	A0A1S3YN79	4e-58	A0A1S3YN79_TOBAC; protein PFC0760c-like
STRING	XP_009630430.1	6e-52	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5014	3	7