PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00255g03015.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 486aa    MW: 53512.3 Da    PI: 6.7525
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00255g03015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.92.7e-30236295159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
  Peinf101Scf00255g03015.1 236 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 295
                               58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081128.564231297IPR003657WRKY domain
SuperFamilySSF1182902.48E-27232297IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.5E-30235297IPR003657WRKY domain
SMARTSM007743.2E-37236296IPR003657WRKY domain
PfamPF031063.8E-27237295IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    Send to blast
MEIDLSLKLD SREEEEVEPS NEENQIGESS QVNAKTQGKD QELPKAEPSK TQELSMLQME  60
MNKMKEENKV LRKAVEQTMK DYYDLQAKFA IIHRNNHEKD HTNFLSLSGN DDTSEGLTRG  120
TKILEINNKT SSPALQEEDD TMDGELGLSL TLVSSNMMSS TSKVDITEEE RLKEKKEDAT  180
ITQIQNRPHG GNLGGLTSHV TAASPPNRKA RVSVRARCES ATKNGKLNKG IQIFQMNDGC  240
QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCLED MSILITTYEG THNHPLPVGA  300
TAMASTTSAA ASFMLVDSSI NPLLSNGNIS NFSQAVNFPY HNAPYNFANS SSSSSPYFSN  360
SRNNLNSSEG NIVLDLTKNI SNDYQRQFPV VNSSNSSSPA QLGHSWMPKL PSNYEGNNTN  420
VNNFFPGNPL PNAERNHNSG NHLAHENMSA IASDPKFRVA VAAAISSLIN KDQSHGESSG  480
SIRHSQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-222362991476WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754405e-49HG975440.1 Solanum pennellii chromosome ch01, complete genome.
GenBankHG9755135e-49HG975513.1 Solanum lycopersicum chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009800949.10.0PREDICTED: probable WRKY transcription factor 9
RefseqXP_016484769.10.0PREDICTED: probable WRKY transcription factor 9
TrEMBLA0A1S4B7C70.0A0A1S4B7C7_TOBAC; probable WRKY transcription factor 9
TrEMBLA0A1U7YNY30.0A0A1U7YNY3_NICSY; probable WRKY transcription factor 9
STRINGXP_009800949.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72872129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.14e-70WRKY DNA-binding protein 9