PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00254g00014.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

G2-like

Protein Properties

Length: 359aa MW: 40991.9 Da PI: 8.0527

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00254g00014.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	70.3	3.1e-22	21	65	2	46
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehv 46 +rlrWtp LH++F++a+++LGG++kAtPk +l+lm+v gLt++hv Peinf101Scf00254g00014.1 21 ARLRWTPHLHRSFLHAIHKLGGQDKATPKLVLQLMDVRGLTISHV 65 69******************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	7.7E-20	17	65	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.51E-8	20	65	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	7.4E-15	22	65	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence Send to blast
MGNCGRINGG GVRQYTRSKV ARLRWTPHLH RSFLHAIHKL GGQDKATPKL VLQLMDVRGL 60 TISHVLYVNE YSTCKNEHSC ILFCRPFLLI TRGFNILVFK QMYRSMKNDV NWQGERSETQ 120 PRKQSPQDHK EVYVDQEKDL AYHSSCSPME RSESPLLYNP LPTKRARMEI ASCKSENPQY 180 CSQRICEAVA NPYRYSGDGY MQTINAENSW VKKRTMEGET GFTRQQTISD TQKEADSVCH 240 TSYFTLDFFQ SCNLSGNALQ QSENFKLSSV QQDENGESWK KCKIERLRKI AENEEKLDDE 300 RCGLSLSLSL HDPCAQTRSN TCSTNEAISS YSSTNNYSTS SSHENHTVNL DLSIALCSQ

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence Send to blast

MGNCGRINGG GVRQYTRSKV ARLRWTPHLH RSFLHAIHKL GGQDKATPKL VLQLMDVRGL  60
TISHVLYVNE YSTCKNEHSC ILFCRPFLLI TRGFNILVFK QMYRSMKNDV NWQGERSETQ  120
PRKQSPQDHK EVYVDQEKDL AYHSSCSPME RSESPLLYNP LPTKRARMEI ASCKSENPQY  180
CSQRICEAVA NPYRYSGDGY MQTINAENSW VKKRTMEGET GFTRQQTISD TQKEADSVCH  240
TSYFTLDFFQ SCNLSGNALQ QSENFKLSSV QQDENGESWK KCKIERLRKI AENEEKLDDE  300
RCGLSLSLSL HDPCAQTRSN TCSTNEAISS YSSTNNYSTS SSHENHTVNL DLSIALCSQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009784028.1	1e-103	PREDICTED: uncharacterized protein LOC104232501
Refseq	XP_016440265.1	1e-103	PREDICTED: uncharacterized protein LOC107766068
TrEMBL	A0A1S3XJV8	1e-102	A0A1S3XJV8_TOBAC; uncharacterized protein LOC107766068
TrEMBL	A0A1U7WZL5	1e-102	A0A1U7WZL5_NICSY; uncharacterized protein LOC104232501
STRING	XP_009784028.1	1e-103	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5433	22	38

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	1e-26	G2-like family protein