PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00251g08012.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 110aa    MW: 12818 Da    PI: 10.447
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00251g08012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR143.97.9e-141166148
                      FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk........t 48
                              +fY +YA++ GFsvr+   +ks++++ i+++ fvCskeg+r+++  k        +
  Peinf101Scf00251g08012.1 11 NFYLDYAHRNGFSVRRGCVTKSRKDKLIISQVFVCSKEGFRSKNILKtidhkmspE 66
                              6*****************************************99887665554431 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.2E-111167IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    Send to blast
MEFSSLDDSF NFYLDYAHRN GFSVRRGCVT KSRKDKLIIS QVFVCSKEGF RSKNILKTID  60
HKMSPEKDAK KKKEHELFVG LYLATITNLL LQVVKTSCVQ KEKSQRLKRI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025884696.12e-20protein FAR1-RELATED SEQUENCE 11-like
RefseqXP_025884722.13e-20protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2G3AKS21e-32A0A2G3AKS2_CAPAN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA645860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.12e-10FAR1-related sequence 12