 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peinf101Scf00239g16004.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
WRKY |
| Protein Properties |
Length: 228aa MW: 26300.7 Da PI: 9.423 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf00239g16004.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 102.4 | 2.6e-32 | 151 | 209 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
Peinf101Scf00239g16004.1 151 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHIHT 209
59*******************************************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:1901141 | Biological Process | regulation of lignin biosynthetic process |
| GO:1904369 | Biological Process | positive regulation of sclerenchyma cell differentiation |
| GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 228 aa
Download sequence Send
to blast |
MFSQNLFEDQ DISSQLGFFT FPPNMGSSAL PFGICNQNNT LKTLTIIPSS FAAADSSLNI 60
ESTAPRQKED HLTSIFGGPQ LLSWQKSTPN TWPWGEVNES IMSRNIKKRD NLDDHHHLGV 120
SAIKMKKIIK SRRKVREPRF CFKTLSDVDV LDDGYKWRKY GQKVVKNTQH PRSYYRCTQD 180
NCRVKKRVER LAEDPRMVIT TYEGRHIHTP SHDEDDSQAS SQLNNLLW
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975516 | 2e-58 | HG975516.1 Solanum lycopersicum chromosome ch04, complete genome. |
