PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00235g07011.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 190aa    MW: 21153.9 Da    PI: 9.5962
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00235g07011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR131.17.7e-1040118591
                      FAR1   5 eYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 
                               ++Ak+ GFs++k++ kk+ ++ + it r+++C k gk+++ +++          +++   a +  ++ + +  wev+++  eHnH
  Peinf101Scf00235g07011.1  40 DHAKKHGFSITKRSCKKQsSEYDLITARRLYCHKAGKPARYQTS----------KKVYWMAGIYATLCSdRTSWEVQSVTVEHNH 114
                               589********99998875777889************9987655..........889999999999999899************* PP

                      FAR1  88 elap 91 
                               +l p
  Peinf101Scf00235g07011.1 115 DLEP 118
                               *975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.0E-640118IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MAGENNDPNV ATGEGPGINL RAPAGGPNVG MKFPSLEAMD HAKKHGFSIT KRSCKKQSSE  60
YDLITARRLY CHKAGKPARY QTSKKVYWMA GIYATLCSDR TSWEVQSVTV EHNHDLEPRL  120
SWLMAAHRKV TPALKRDLVA ADTAGVRPCR SQWVPVYLTD XEPVGAGIPE RHVLGWYEIH  180
TAERVNARIL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7498216