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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf00231g01029.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
WRKY |
Protein Properties |
Length: 461aa MW: 50554.9 Da PI: 6.8887 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf00231g01029.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 106.9 | 9.9e-34 | 170 | 226 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpv+kkvers d++v+ei+Y+g+Hnh+
Peinf101Scf00231g01029.1 170 DDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVTKKVERSL-DGQVTEIIYKGQHNHQ 226
8****************************************.***************8 PP
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2 | WRKY | 106.6 | 1.2e-33 | 336 | 394 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Cts+gC+v+k+ver+a+dpk+v++tYeg+Hnh+
Peinf101Scf00231g01029.1 336 LDDGYKWRKYGQKVVKGNPYPRSYYKCTSQGCNVRKHVERAASDPKAVITTYEGKHNHD 394
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 461 aa
Download sequence Send
to blast |
MAENQPSSTS APMRPTITLP PRASMESLFM GGPGGVSPGP MTLVSNFFSN PDSEYPSFSQ 60 LLAGAMASPA DGFWTVKGPF GMSHQQALAQ VTAQAAQPQS LLHIQPDYPP TSAAPAPSDS 120 QFQSLTSNAT TNQHMPAPTS DPNVMKEASE VSLSDQRSEP ASIAVDKPAD DGYNWRKYGQ 180 KQVKGSEYPR SYYKCTHPNC PVTKKVERSL DGQVTEIIYK GQHNHQPPQH SKRSKESGNP 240 NGIYNLQGPS GLSQAYVPSY SLTMKDQESS QATHDQISEL NEGEEVGDAE NIADGNDERE 300 SKRRAIEVQT SDAASSHRTV AEPRIIVQTT SEVDLLDDGY KWRKYGQKVV KGNPYPRSYY 360 KCTSQGCNVR KHVERAASDP KAVITTYEGK HNHDVPAARN SSHNTTNNSV PQLRPHNPVV 420 AKQDATRRTV LRNNEQQPIA LLRFKEEQLP SLLEQDLSLA T
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF096299 | 0.0 | AF096299.1 Nicotiana tabacum DNA-binding protein 2 (WRKY2) mRNA, complete cds. |