PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00190g05004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 326aa    MW: 35312.9 Da    PI: 7.8193
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00190g05004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00076130152123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               y+C+ C+++F++   L  H  +H
  Peinf101Scf00190g05004.1 130 YECKTCNRTFPSFQALGGHRASH 152
                               99**********99999998887 PP
2zf-C2H213.50.00021232254123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++C++Cg  Fs+   L  H+r+H
  Peinf101Scf00190g05004.1 232 HECSICGSEFSSGQALGGHMRRH 254
                               78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139123.0E-13129154IPR007087Zinc finger, C2H2
SuperFamilySSF576676.0E-9129152No hitNo description
SMARTSM003550.052130152IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.658130157IPR007087Zinc finger, C2H2
PROSITE patternPS000280132152IPR007087Zinc finger, C2H2
SuperFamilySSF576676.0E-9227254No hitNo description
PfamPF139125.9E-12231256IPR007087Zinc finger, C2H2
PROSITE profilePS501579.91232259IPR007087Zinc finger, C2H2
SMARTSM003550.02232254IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280234254IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MEVSQRPYTF KGKRSKRSRP SSPLYLAGTT TVTTSSSTVG GSDDGGHGGG GDFYYSSSTQ  60
YSPTTSTTQI STSSTSEEDE DMANCLILLA QSGGSRKVQV VSEVKKDKIS SRKFTEMVST  120
TTGKAGFYVY ECKTCNRTFP SFQALGGHRA SHKKPKTIVL EEKKPVNVTA TATDSLAENI  180
NEDHSLENDQ EDGQFNKLSP SLPIKIGVNN NNNKKGMNSH DNCNSSSKTK VHECSICGSE  240
FSSGQALGGH MRRHRPPTTT SPITKLSTNT ETISNIVSES SQKNFLSLDL NLPAPPEDDV  300
RDTKFDFSAN QQSLVFSTAA LVDCHY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009766818.11e-127PREDICTED: zinc finger protein ZAT5-like
TrEMBLA0A1U7VKE91e-125A0A1U7VKE9_NICSY; zinc finger protein ZAT5-like
STRINGXP_009766818.11e-126(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12622480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.17e-53C2H2 family protein