PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00187g01015.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 243aa    MW: 27155.3 Da    PI: 5.1622
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00187g01015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-083565131
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                              rg+WT eEd  l ++++ +G g+W++ ar+ 
  Peinf101Scf00187g01015.1 35 RGPWTVEEDFALMNYIAHHGEGRWNSLARCA 65
                              89**************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.17E-83071IPR009057Homeodomain-like
PROSITE profilePS5129411.4983085IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.2E-103369IPR009057Homeodomain-like
PfamPF002492.0E-63564IPR001005SANT/Myb domain
CDDcd001672.65E-53768No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MDHHHHVKVG SSRGGGANCN KNNQQQHDED MDLRRGPWTV EEDFALMNYI AHHGEGRWNS  60
LARCAVERIQ AAAANNTTNS NNPSKSQMVH QTINSNMSGM SEFVPIHDNV VSTNKPRLMS  120
TENSSTAAAS SENSFGTQVS PVNSDLTDCC YNYPPVNQDY FQVSHHQSTT NNDQLCHGES  180
LTSPTGYFLH GTGLDQFQGM DQQQNMNSSQ WMDGGNNFSD SLWNIDDMWF LQQQLNNNNN  240
NVV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006337993.17e-47PREDICTED: transcription factor MYB108-like
TrEMBLM1AGY32e-45M1AGY3_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000226003e-46(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.12e-18myb domain protein 78