PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00184g02022.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | AP2 | ||||||||
Protein Properties | Length: 472aa MW: 52453.8 Da PI: 6.9926 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.8 | 8.6e-11 | 206 | 262 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++ g rk + g ++ +++Aa+a++ a++k++g Peinf101Scf00184g02022.1 206 SIYRGVTRHRWTGRYEAHLWDnSCKrEGqARKGRQ-GGYDKEDKAARAYDLAALKYWG 262 57*******************88885555446666.7799999*************98 PP | |||||||
2 | AP2 | 52.1 | 1.6e-16 | 296 | 347 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Peinf101Scf00184g02022.1 296 SKYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 347 89****************988532...5************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.2E-8 | 206 | 262 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.86E-13 | 206 | 270 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 3.32E-18 | 206 | 271 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 2.8E-11 | 207 | 271 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.779 | 207 | 270 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.7E-19 | 207 | 276 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.0E-6 | 208 | 219 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.4E-10 | 296 | 347 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-18 | 296 | 356 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 4.66E-12 | 296 | 355 | No hit | No description |
PROSITE profile | PS51032 | 19.401 | 297 | 355 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.0E-18 | 297 | 355 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 8.6E-32 | 297 | 361 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.0E-6 | 337 | 357 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence Send to blast |
MAPENNWLSF SLSSMEMLNS SSQSSMLQSN LNSSSAASHQ YYFADNFYPH EGENHVNEVT 60 RHNMNNNSFG FQGYMDSQIH QQSQPKLEDF LGNDFRYSDS QTDTQDSSLT HIYHDHQDLK 120 SIAAGFQTFS TNSGSEVEDS ASVGRTTQVM GGDQFIESGN ELGFPQCATG ALSLAVNNTH 180 SSQKAVVAVE SESCKKISDT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCK REGQARKGRQ 240 GGYDKEDKAA RAYDLAALKY WGSSATTNLP EMKHMTKQEF IASLRRKSSG FSRGASKYRG 300 VTRHHQQGRW QARIGRVAGN KDLYLGTFAT EEEAAEAYDI AAIKFRGVNA VTNFEMNRYD 360 VEAIMKSALP VGGAAKRLKL SLESEQKLSL CNNQQTQSNS TDNHISFGAM PHVSPIPYGV 420 PFDTAAPYYH HNFFHQLHMN NAGVSDASGA ITTMAAAMPT LNSPAELFFW PH |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009603183.1 | 0.0 | PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 | ||||
Swissprot | Q52QU2 | 1e-163 | AIL6_ARATH; AP2-like ethylene-responsive transcription factor AIL6 | ||||
TrEMBL | A0A2R6S303 | 0.0 | A0A2R6S303_ACTCH; AP2-like ethylene-responsive transcription factor | ||||
STRING | XP_009603183.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2580 | 24 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10510.2 | 1e-135 | AINTEGUMENTA-like 6 |
Publications ? help Back to Top | |||
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