PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peinf101Scf00181g13006.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

FAR1

Protein Properties

Length: 310aa MW: 35610.2 Da PI: 9.3733

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00181g13006.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.4	1.4e-19	54	139	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 Yn+YA e GF vrk ++++ rn+ it+ f Cs+egk+++ + e+++r+r e r+gC a++k k + +g wev +++ H+ Peinf101Scf00181g13006.1 54 AYNSYAVEKGFGVRKGVKTHN-RNKVITRCLFLCSCEGKSSKLSPY-EERKRKRLEYRCGCMARIKFKIS-NGIWEVCEFNDMHS 135 5*************99998.8888************9999.9999*************99.************ PP FAR1 87 Hela 90 H++ Peinf101Scf00181g13006.1 136 HPMI 139 *985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.9E-16	54	139	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence Send to blast
MEDLNVENGL SNQEDYTVKD QQLFTKAHNV CNINKNFVFE IGMKFGSEEE SYNAYNSYAV 60 EKGFGVRKGV KTHNRNKVIT RCLFLCSCEG KSSKLSPYEE RKRKRLEYRC GCMARIKFKI 120 SNGIWEVCEF NDMHSHPMIE DNLRHFIQSA ANDVDSEKIA RKYLYQANVE ITRFQSKLYA 180 EGRDKGVHKF NSIVDPCQDS KDIILDPIKK KGKGKGYKRL KPNIEKGRKK ASQKTLKDKV 240 GHPNEQQSFS TMAATVNAQS SSMSQTFPSF EFYEESSNTF TQLLTQDSIL WTTGYNQNRG 300 LNNMQSNIGI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019266793.1	7e-65	PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA20528	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	9e-08	FAR1-related sequence 10