PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00175g07024.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | G2-like | ||||||||
Protein Properties | Length: 571aa MW: 64608.6 Da PI: 5.793 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 83 | 3.3e-26 | 176 | 229 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+ Wtp++H++F++a++qL G+ekA+Pk+i+e+m+ +gLt+ehv+SHLQkYR+ Peinf101Scf00175g07024.1 176 KRRVIWTPKMHQNFLRAIQQL-GHEKAVPKKIVEIMNEPGLTREHVASHLQKYRM 229 679******************.********************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.6E-26 | 174 | 233 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 8.24E-18 | 175 | 233 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.6E-24 | 176 | 229 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 571 aa Download sequence Send to blast |
MGTKSICILL VIDDFTCHNI VTDMLHNQTY EVLHVGKIMD TLNAIWERKS NLNLVLTNIH 60 RLNTNVMSPD DARYENQIQD CNVAAYVVNF SDTDEMNKLW QMALQKEKGR KAATNQEAND 120 EKNALSMPQN VTKSSTENTS SDDNDAEISA HDLKGKRKAF TEKNEENGEN RDIEKKRRVI 180 WTPKMHQNFL RAIQQLGHEK AVPKKIVEIM NEPGLTREHV ASHLQKYRMC LKRAQESLAA 240 TSIYDQILSN DAKDEYFQFQ PCLSSPNFIT SRGYSHSRQQ PFQTHFQQAT DGLGQNLRQP 300 QMVSIHELSS FQQQNSYLKF ANWRQTNNSG LIGQQFTSLP RLAHSSNFRV YGDKTKNMLF 360 SIQSGSANQP TNSNSGLDFI GFKLSKDGKS VHFGHKGSSC AVTSNNTYSG LCSSMSENYI 420 QQQQSSSPFL ETPIENTLIQ CSSAPSENFT FHHLQATLPS TQQHPSNSIS DQQSVLLFEN 480 ATNKISYQSL EMPANILGDL EDYSALLFGD EVSVPAQENC RNYDCRQQEY SAPDEINSFG 540 TEVDIIKSLL ETTENSSSQQ FWEGDTENEL H |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 8e-17 | 174 | 233 | 3 | 62 | ARR10-B |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 155 | 177 | KRKAFTEKNEENGENRDIEKKRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019223863.1 | 0.0 | PREDICTED: putative two-component response regulator ARR21 | ||||
TrEMBL | A0A1S4AV91 | 0.0 | A0A1S4AV91_TOBAC; two-component response regulator ARR12-like | ||||
STRING | XP_009598455.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3659 | 16 | 20 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.1 | 4e-29 | response regulator 1 |