PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

NAC

Protein Properties

Length: 276aa MW: 31274.3 Da PI: 7.9051

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00168g02010.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	101.3	1.4e-31	62	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrkn 75 lp+G++F+P+d+el+ e+L++kve + ++ e+i++++ i++++P +Lp +fF++ +k+y+tg+rk+ Peinf101Scf00168g02010.1 62 LPAGVKFDPSDQELL-EHLEAKVEVDAqnlhplID--EFIQTLEgkdgICYTHPDKLP--------VRHFFHRPSKAYTTGTRKR 135 799**********.999988855654422..23443323335*****9........359************** PP NAM 76 ratk......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 r+++ + +W++tgk+++++ +g+++g kk+Lv+y g+++k+ekt+Wvmh+y+l Peinf101Scf00168g02010.1 136 RKVHtniegnETRWHKTGKTRPIVI-QGKAKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 195 744345555888*********.9999******6657999999*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.31E-34	56	214	IPR003441	NAC domain
PROSITE profile	PS51005	29.013	62	214	IPR003441	NAC domain
Pfam	PF02365	1.4E-15	63	195	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence Send to blast
MTCSNESADE QSIPSKDRPS NSLENPFTNG TPKPKTMVCP SCGHPIRSVE KEQDGIHNLP 60 GLPAGVKFDP SDQELLEHLE AKVEVDAQNL HPLIDEFIQT LEGKDGICYT HPDKLPVRHF 120 FHRPSKAYTT GTRKRRKVHT NIEGNETRWH KTGKTRPIVI QGKAKGYKKI LVLYTNYGKQ 180 RKPEKTNWVM HQYHLGDDED EKEGELVISK VFYQTQPRQC ASLIKDFSIA VGANGQDGSH 240 LKESTLVESF NPTIISFDQC ELNRPTPRFL SNFNIP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777). {ECO:0000269\|PubMed:18952777, ECO:0000269\|PubMed:22133261}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019193007.1	1e-134	PREDICTED: NAC domain-containing protein 73-like
Swissprot	O49459	1e-105	NAC73_ARATH; NAC domain-containing protein 73
TrEMBL	A0A2Z5HVI9	1e-134	A0A2Z5HVI9_IPOBA; NAC8 protein
STRING	XP_009587632.1	1e-124	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2875	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-101	NAC domain containing protein 73

Publications ? help Back to Top
Srinivasasainagendra V,Page GP,Mehta T,Coulibaly I,Loraine AE CressExpress: a tool for large-scale mining of expression data from Arabidopsis. Plant Physiol., 2008. 147(3): p. 1004-16 [PMID:18467456] Sakamoto S,Mitsuda N Reconstitution of a secondary cell wall in a secondary cell wall-deficient Arabidopsis mutant. Plant Cell Physiol., 2015. 56(2): p. 299-310 [PMID:25535195] Jervis J, et al. A metabolomic assessment of NAC154 transcription factor overexpression in field grown poplar stem wood. Phytochemistry, 2015. 115: p. 112-20 [PMID:25771508]