PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00159g03007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | MYB_related | ||||||||
Protein Properties | Length: 212aa MW: 24088.7 Da PI: 4.2567 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.8 | 8.1e-11 | 15 | 46 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd++l+++++ +G+g+W++ ++ g Peinf101Scf00159g03007.1 15 KGPWTPEEDLKLIQYIEVHGPGNWRSLPKNAG 46 79************************999988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.1E-12 | 7 | 45 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 12.736 | 10 | 55 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 4.67E-9 | 11 | 46 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 4.1E-9 | 15 | 46 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 3.17E-7 | 17 | 46 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
MGRSPITSDK SGLKKGPWTP EEDLKLIQYI EVHGPGNWRS LPKNAGLQAL VNPQFLRLAT 60 TLLTSHTENN PEMLLQRLQA NQLLNTQIQK HEEPEMLLRE LQQNQFLENQ FQSQITENPT 120 CTPSNLVPYF VNGQNLQENV MQPLQTNGGC TSDVQSENSN FESLNNTSNQ NFSFDSVFST 180 PLSSTEDERD SYCSNFMKFE IPESLCNFDD LL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009764351.1 | 4e-51 | PREDICTED: transcription factor MYB39-like | ||||
Refseq | XP_016458866.1 | 4e-51 | PREDICTED: transcription factor MYB39-like | ||||
TrEMBL | A0A1S3Z354 | 1e-49 | A0A1S3Z354_TOBAC; transcription factor MYB39-like | ||||
TrEMBL | A0A1U7VHH0 | 1e-49 | A0A1U7VHH0_NICSY; transcription factor MYB39-like | ||||
STRING | XP_009764351.1 | 2e-50 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G05100.1 | 2e-21 | myb domain protein 74 |