 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Peinf101Scf00152g01009.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 406aa MW: 44395.2 Da PI: 7.1302 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf00152g01009.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58.7 | 9.4e-19 | 221 | 275 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee F+++++++ ++++ LAk+l+L rqV vWFqNrRa+ k
Peinf101Scf00152g01009.1 221 RKKLRLSKEQSAYLEESFKEHHTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 275
778899***********************************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 406 aa
Download sequence Send
to blast |
MELGLSLGDT NNTATTTAAA SKSCFLSKNI NTSSSDHIQN HSCKKKRKGL GFCMALGINS 60
SGRVQEDDDD ETPEKSQEND DDDDLEDDRT SEEGRDNTSL KPVQLDLLPL VPVPRRNLPH 120
QPLHWSSSNG SSENGSSGNG GLPAARGFDV NRLPAAGTME EVSSPNSVAS SFQMDFGLLK 180
GFGNLIGNKR NSESAGVNDG GEPERASSRA SDEDENGLNT RKKLRLSKEQ SAYLEESFKE 240
HHTLNPKQKQ ALAKQLNLRP RQVEVWFQNR RARTKLKQTE VDCEYLKRCC ETLTEENRRL 300
HKELQELRAL KTSNPFYMQL PATTLTMCPS CERVASTTSA ATAPPITPTG TTTIATTSKA 360
PPTKTTTPTS TTTTTSDTIP KAIPFLSRPR FFPFTTTNNP NQSAAS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 219 | 225 | TRKKLRL |
| 2 | 269 | 277 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
