PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00149g00012.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 269aa    MW: 29904.6 Da    PI: 5.6586
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00149g00012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.31e-25151431121
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.k.....kvka..eekewyfFskrdkkyatgkrknr 76 
                               lppG rF P+d++l+++yL  k + ++ ++  + ike+d+y+++P +Lp +            +++w+ F++ ++  +     +r
  Peinf101Scf00149g00012.1  15 LPPGTRFYPSDSQLISYYLSSKNQPEPeHDHPNLIKELDLYNYDPFNLPdSscfkyG--RggCKRHWFCFVEISRVLKG--GVRR 95 
                               79**********************9995555566**************953665331..22244588888888887654..5667 PP

                       NAM  77 atksgyWkatgkdkevlsk..kgelvglkktLvfykg.rapkgektdW 121
                               ++  gyWk+ g+ ++v+ +  ++ +vg++k++ fy g + ++++ktdW
  Peinf101Scf00149g00012.1  96 KAGGGYWKKRGRVRDVVGEgtGKVVVGTRKSFSFYLGdSVKSAVKTDW 143
                               7899*************99767778**********884567788**** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-2911154IPR003441NAC domain
PROSITE profilePS5100528.81515173IPR003441NAC domain
PfamPF023651.8E-1416143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MGDPNLNPNP NPFLLPPGTR FYPSDSQLIS YYLSSKNQPE PEHDHPNLIK ELDLYNYDPF  60
NLPDSSCFKY GRGGCKRHWF CFVEISRVLK GGVRRKAGGG YWKKRGRVRD VVGEGTGKVV  120
VGTRKSFSFY LGDSVKSAVK TDWASFVLCR VFIKSRQGNS LSEQHVLSSY GEETVGAVRH  180
VGIQYDGPAS VSESKMHDEN SVDQENDVSK LPNVLVTDLN GQTLTKQQID LESEGPPVLN  240
DFSAQELMAI LEGDFIELDD LLCPLPGIS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-171514315133Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771077.11e-129PREDICTED: NAC domain-containing protein 19-like isoform X1
RefseqXP_016443535.11e-129PREDICTED: NAC domain-containing protein 19-like isoform X1
TrEMBLA0A1S3XUJ21e-128A0A1S3XUJ2_TOBAC; NAC domain-containing protein 19-like isoform X1
TrEMBLA0A1U7VT571e-128A0A1U7VT57_NICSY; NAC domain-containing protein 19-like isoform X1
STRINGXP_009771077.11e-128(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA135281314
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.12e-14NAC family protein