PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00140g06006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | bHLH | ||||||||
Protein Properties | Length: 385aa MW: 43121.8 Da PI: 5.1145 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.6 | 1.7e-06 | 282 | 320 | 11 | 54 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L++A+eYIk L Peinf101Scf00140g06006.1 282 VRKEKMGDRITALQQLVSPF-----GKTDTASVLQEAIEYIKFL 320 5778999**********998.....8****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.678 | 271 | 320 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.8E-9 | 281 | 328 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 7.72E-12 | 281 | 331 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.37E-7 | 281 | 324 | No hit | No description |
SMART | SM00353 | 0.0015 | 282 | 326 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 385 aa Download sequence Send to blast |
MAEEFQAGVC GDSWWNYSTS FGNSSVCASS IHDPIGHDFA WPISDLLDMK DKSSDESCSD 60 DSMVLQELPK HDHLLDSFSS TPVNFHDKLD SNYPSMLQED NTNSRLNYRQ EKGLIPELKR 120 NFSSISEDSS SNSFKPINQD FAPGLHPFNP VTTSSTTEST VTCQRQNSSF AYSSDLLQTL 180 FDTDTQQPQQ PLFDNNQPIN YASSTNYRQN LNNFAPSLPK YPDLLKPSLA KQTPSNHITS 240 SKSNIEEIQE STTSSLTENR SNEPSYKRPR IETPSALPTF KVRKEKMGDR ITALQQLVSP 300 FGKTDTASVL QEAIEYIKFL HDQVNVLSTP CVKNGSPTQR QQVKEQGLKQ ELRKRGLCLV 360 PMSSTFPAVA ETMDFWTPAL GGSFR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016437700.1 | 1e-142 | PREDICTED: transcription factor bHLH112-like | ||||
TrEMBL | A0A1S3XCN8 | 1e-140 | A0A1S3XCN8_TOBAC; transcription factor bHLH112-like | ||||
STRING | XP_009617305.1 | 1e-141 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA860 | 24 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61660.3 | 4e-50 | bHLH family protein |