PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00131g05011.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

NAC

Protein Properties

Length: 389aa MW: 44905.7 Da PI: 8.6954

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00131g05011.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	155.4	2.5e-48	38	174	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWk 84 pGfrFhPtdeelv +yL++kve+k e ik++diyk++PwdLpk +v++++kewyfF+ r +ky+++ r+nr+t+sg+Wk Peinf101Scf00131g05011.1 38 LPGFRFHPTDEELVGFYLRRKVENKLRMNMELIKQLDIYKYDPWDLPKvsTVAGDHKEWYFFCMRGRKYKNSVRPNRVTRSGFWK 122 69*******************998555599***********5446677889************************ PP NAM 85 atgkdkevlsk..kgel........vglkktLvfykgrapkgektdWvmheyrl 128 atg dk+v+s+ + + +glkk Lv+y+g a kg+ktdW+mhe+rl Peinf101Scf00131g05011.1 123 ATGIDKPVYSTtaT--KleslhhdcIGLKKCLVYYRGCAGKGTKTDWMMHEFRL 174 ******8550..345555666*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.88E-51	35	202	IPR003441	NAC domain
PROSITE profile	PS51005	51.537	37	203	IPR003441	NAC domain
Pfam	PF02365	1.4E-25	39	174	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence Send to blast
MNRVKKGQEN NSESMEVKQT EAAKSNIKDS DIEEEVILPG FRFHPTDEEL VGFYLRRKVE 60 NKLRMNMELI KQLDIYKYDP WDLPKVSTVA GDHKEWYFFC MRGRKYKNSV RPNRVTRSGF 120 WKATGIDKPV YSTTATKLES LHHDCIGLKK CLVYYRGCAG KGTKTDWMMH EFRLPLTWKT 180 TSNHLPNTHH EAEVWTLCRI FKRTSNYKKY LPEVKHHISL SYGDASSKAC SSLESENSTD 240 DHSASFKNMS FEQENNNVEN GEKQMDVRNH HFCISQQNAA SQSPFTSSSS SFWDTNSQEE 300 YLFCDGKWDE LKSIVDLATD PSIEVWTLCR IFKRTSNYKR SSPAVKHHIV SLSYGDASSK 360 VCSSLDFKTV VTTTPPALKT CHFNKKTTM

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence Send to blast

MNRVKKGQEN NSESMEVKQT EAAKSNIKDS DIEEEVILPG FRFHPTDEEL VGFYLRRKVE  60
NKLRMNMELI KQLDIYKYDP WDLPKVSTVA GDHKEWYFFC MRGRKYKNSV RPNRVTRSGF  120
WKATGIDKPV YSTTATKLES LHHDCIGLKK CLVYYRGCAG KGTKTDWMMH EFRLPLTWKT  180
TSNHLPNTHH EAEVWTLCRI FKRTSNYKKY LPEVKHHISL SYGDASSKAC SSLESENSTD  240
DHSASFKNMS FEQENNNVEN GEKQMDVRNH HFCISQQNAA SQSPFTSSSS SFWDTNSQEE  300
YLFCDGKWDE LKSIVDLATD PSIEVWTLCR IFKRTSNYKR SSPAVKHHIV SLSYGDASSK  360
VCSSLDFKTV VTTTPPALKT CHFNKKTTM

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	2e-43	28	209	5	174	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269\|PubMed:22345491}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269\|PubMed:22345491}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975444	4e-43	HG975444.1 Solanum pennellii chromosome ch05, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009621672.1	1e-155	PREDICTED: transcription factor JUNGBRUNNEN 1-like
Swissprot	Q9SK55	9e-89	NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBL	A0A1S3XIG2	1e-153	A0A1S3XIG2_TOBAC; transcription factor JUNGBRUNNEN 1-like
STRING	XP_009621672.1	1e-154	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1697	24	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	3e-87	NAC domain containing protein 42

Publications ? help Back to Top
Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins. Plant Signal Behav, 2016. 11(6): p. e1181245 [PMID:27159137] Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling. Nat Plants, 2016. 2: p. 16013 [PMID:27249348] Shahnejat-Bushehri S, et al. Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Front Plant Sci, 2017. 8: p. 214 [PMID:28326087] Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways. Plant J., 2017. 92(6): p. 1106-1120 [PMID:29032592] Ebrahimian-Motlagh S, et al. JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13. Front Plant Sci, 2017. 8: p. 2118 [PMID:29326734]