PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00128g01014.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 177aa    MW: 20238.5 Da    PI: 9.9659
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00128g01014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.36.6e-14911582192
                               HH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                        B3  21 kfaeehggkkeesktltledesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkldgrsefel 92 
                               +f++++g+  ++  ++tl + +g  W+v l  r +++++v++ kGW +F kang+k+gD   F+l++ s++ +
  Peinf101Scf00128g01014.1  91 PFVKSNGLMDKS--EMTLVNGEGTPWSVCL--RPNGRSFVIKrKGWTKFMKANGVKVGDAYKFELVD-SGTIP 158
                               689999776433..8***************..999999888669********************987.45444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.6E-1345161IPR015300DNA-binding pseudobarrel domain
SMARTSM010194.9E-982166IPR003340B3 DNA binding domain
SuperFamilySSF1019361.51E-1390160IPR015300DNA-binding pseudobarrel domain
PfamPF023621.3E-1291162IPR003340B3 DNA binding domain
CDDcd100171.89E-1392164No hitNo description
PROSITE profilePS5086311.09692165IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MEIPQRFRWF PMEKHMYSDF TANIRIKTSD VTVPKSQMLA SISADDANPH FINIIQPHTI  60
SNPVLVSNLN KVSTYYYYIV YFLSFLVDYA PFVKSNGLMD KSEMTLVNGE GTPWSVCLRP  120
NGRSFVIKRK GWTKFMKANG VKVGDAYKFE LVDSGTIPTA IILRRMPRSA EVIDKNN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32215171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-11B3 family protein