PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00125g05004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 293aa    MW: 33172.3 Da    PI: 4.4153
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00125g05004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-08182225632
                               HHHHHHHHHHHHHHHHHHHCTSCC.C.................. CS
                       HLH   6 nerErrRRdriNsafeeLrellPk.as................k 32 
                                ++ErrRR+r+N++++ Lr+++Pk +                 +
  Peinf101Scf00125g05004.1 182 LMAERRRRKRLNDRLSMLRSVVPKiSKfdverrnidtrveincA 225
                               589********************955466666666666666664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.5E-7176208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.998176248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.1E-6182238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-6183207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MEYYNENGFL LDEILLALRS DSWDTSHVPI EMTDFHYNIN GLNNEYLEEN HVTIPLPCTT  60
TTTTTTISSF EEYIELPFDQ NLNYSSLISE LFSNTTLELT DSSNNWQLDT SLFTSSPILE  120
NEVIGNSCSF QDLEVGNIAC KLERAQSIEA QNVTAPTFNI GLCPEEIKVK TKKQNGQPSK  180
NLMAERRRRK RLNDRLSMLR SVVPKISKFD VERRNIDTRV EINCAGKSSL LLSTLTTLDL  240
SGQDIQQCVI SCFNDFAMQA SCFEELDAKQ VLTNVEDIKQ ALFRNAGYGG RCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184191ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009623441.18e-87PREDICTED: transcription factor bHLH93-like
RefseqXP_016490472.18e-87PREDICTED: transcription factor bHLH93-like
TrEMBLA0A1S4BNM42e-85A0A1S4BNM4_TOBAC; transcription factor bHLH93-like
STRINGXP_009623441.13e-86(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7892497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10570.12e-30bHLH family protein