PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peinf101Scf00123g12010.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

NAC

Protein Properties

Length: 579aa MW: 67023.3 Da PI: 6.213

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00123g12010.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.5	8.7e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyW 83 lppGfrFhPtdeelv +yLk+k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyfF +rd+ky++g+r+nratk+gyW Peinf101Scf00123g12010.1 6 LPPGFRFHPTDEELVAYYLKRKINGRTIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFGPRDRKYPNGSRTNRATKAGYW 89 79**************************.99***********6434555777*********************** PP NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 katgkd++v+s + ++vg+kktLv+y+grap+g +tdWvmheyrl Peinf101Scf00123g12010.1 90 KATGKDRKVHS-QMRAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 *******.9999*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.4E-63	3	156	IPR003441	NAC domain
PROSITE profile	PS51005	61.511	6	156	IPR003441	NAC domain
Pfam	PF02365	1.9E-29	7	133	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence Send to blast
MASVSLPPGF RFHPTDEELV AYYLKRKING RTIELEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFGPR DRKYPNGSRT NRATKAGYWK ATGKDRKVHS QMRAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDERECEV ANGLQDAYAL CRIFKKSLNA PKVEYPFASA ATDRSSSIDV 180 YSEGRSDHDI MESSEHRRPS PTCSSMVANN SPLHDVAGPS DDKWMQYISD AAFSFNNPSI 240 PNYGTLPYAP KFNIALECAR LQHRFSLPPL EVHDFSEAGY VKSRMPQSSY INQNTNQTSQ 300 DLINQDSWDG NYAPTSHDFS FLPHDHNQIH DLGSFHFMEQ FKEDQIARPT EFGELDGHFK 360 SDRIVENLRW VEMSDMDLEK AFLEDYKTVP VDNVSSVVKE EYELEGETNG VNNSSNEFNK 420 IEDNFSLGFG NNNNTDEFSN SLCLEVYEKI EINHRMLIAT QQASKTLYHQ VVPSTTVRIH 480 RNFEKSESIK LPQNRTTFFD CLFEVLRKKL LMTRSWKRAL DLLVGVITLL NTLWMYFNLC 540 LENQGLIEKI IEGKEKNRKA HDYQWSCKDW PYFTLVEIS

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence Send to blast

MASVSLPPGF RFHPTDEELV AYYLKRKING RTIELEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFGPR DRKYPNGSRT NRATKAGYWK ATGKDRKVHS QMRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDERECEV ANGLQDAYAL CRIFKKSLNA PKVEYPFASA ATDRSSSIDV  180
YSEGRSDHDI MESSEHRRPS PTCSSMVANN SPLHDVAGPS DDKWMQYISD AAFSFNNPSI  240
PNYGTLPYAP KFNIALECAR LQHRFSLPPL EVHDFSEAGY VKSRMPQSSY INQNTNQTSQ  300
DLINQDSWDG NYAPTSHDFS FLPHDHNQIH DLGSFHFMEQ FKEDQIARPT EFGELDGHFK  360
SDRIVENLRW VEMSDMDLEK AFLEDYKTVP VDNVSSVVKE EYELEGETNG VNNSSNEFNK  420
IEDNFSLGFG NNNNTDEFSN SLCLEVYEKI EINHRMLIAT QQASKTLYHQ VVPSTTVRIH  480
RNFEKSESIK LPQNRTTFFD CLFEVLRKKL LMTRSWKRAL DLLVGVITLL NTLWMYFNLC  540
LENQGLIEKI IEGKEKNRKA HDYQWSCKDW PYFTLVEIS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-55	1	162	12	171	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-55	1	162	12	171	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-55	1	162	12	171	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-55	1	162	12	171	NO APICAL MERISTEM PROTEIN
3swm_A	2e-55	1	162	15	174	NAC domain-containing protein 19
3swm_B	2e-55	1	162	15	174	NAC domain-containing protein 19
3swm_C	2e-55	1	162	15	174	NAC domain-containing protein 19
3swm_D	2e-55	1	162	15	174	NAC domain-containing protein 19
3swp_A	2e-55	1	162	15	174	NAC domain-containing protein 19
3swp_B	2e-55	1	162	15	174	NAC domain-containing protein 19
3swp_C	2e-55	1	162	15	174	NAC domain-containing protein 19
3swp_D	2e-55	1	162	15	174	NAC domain-containing protein 19
4dul_A	2e-55	1	162	12	171	NAC domain-containing protein 19
4dul_B	2e-55	1	162	12	171	NAC domain-containing protein 19
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019267109.1	0.0	PREDICTED: NAC domain-containing protein 86-like
TrEMBL	A0A314KYT1	0.0	A0A314KYT1_NICAT; Nac domain-containing protein 86
STRING	XP_009598687.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1495	23	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-141	NAC domain containing protein 28