PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00102g44013.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

G2-like

Protein Properties

Length: 412aa MW: 47990.8 Da PI: 9.8978

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00102g44013.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.4	2.5e-31	85	138	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+a+e+LGG+e+AtPk +l+lm++ gL+++hvkSHLQ+YR+ Peinf101Scf00102g44013.1 85 PRLRWTPDLHRSFVHAIERLGGQERATPKLVLQLMNLRGLSIAHVKSHLQMYRS 138 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	6.3E-29	81	139	IPR009057	Homeodomain-like
PROSITE profile	PS51294	10.871	81	141	IPR017930	Myb domain
SuperFamily	SSF46689	1.65E-14	82	139	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.9E-22	85	140	IPR006447	Myb domain, plants
Pfam	PF00249	5.2E-8	86	137	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence Send to blast
MTESAKQGNE EMEYITGKAS SDSSSHRASS IDLNEDNKEE TEEATEFSGE ECSEKTTEGN 60 SEDNISGDAH VQKKNVRQYV RSKTPRLRWT PDLHRSFVHA IERLGGQERA TPKLVLQLMN 120 LRGLSIAHVK SHLQMYRSKK LDECGQVLGQ GYRAMQGRSY FYGDLRQRYN PLQDFKMKNG 180 AIVLARNFDN GDHVKGQFQK EYSRSQFHAK GIFSRYFESL KGEDLRENKK LFRMKSWQTQ 240 ERLSTPKQFQ EHKSNEICSI RSSQFLEEKR WPPREFITNK WEEKRSQYLL HPNVQPYYKW 300 NCRYNTVLEQ NSGTSFRREN IVNGLRIMFA GGGELTVSVA GKKKYLVVVV MYWRWSGGER 360 LQRWGREGAG RDKLSTDYKN ENRPHQSKMR DQSDHINTML SLSLPTYSSS AT

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence Send to blast

MTESAKQGNE EMEYITGKAS SDSSSHRASS IDLNEDNKEE TEEATEFSGE ECSEKTTEGN  60
SEDNISGDAH VQKKNVRQYV RSKTPRLRWT PDLHRSFVHA IERLGGQERA TPKLVLQLMN  120
LRGLSIAHVK SHLQMYRSKK LDECGQVLGQ GYRAMQGRSY FYGDLRQRYN PLQDFKMKNG  180
AIVLARNFDN GDHVKGQFQK EYSRSQFHAK GIFSRYFESL KGEDLRENKK LFRMKSWQTQ  240
ERLSTPKQFQ EHKSNEICSI RSSQFLEEKR WPPREFITNK WEEKRSQYLL HPNVQPYYKW  300
NCRYNTVLEQ NSGTSFRREN IVNGLRIMFA GGGELTVSVA GKKKYLVVVV MYWRWSGGER  360
LQRWGREGAG RDKLSTDYKN ENRPHQSKMR DQSDHINTML SLSLPTYSSS AT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-17	86	140	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-17	86	140	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	1e-17	86	140	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-17	86	140	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-17	86	140	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-17	86	140	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-17	86	140	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-17	86	140	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-17	86	140	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-17	86	140	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-17	86	140	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-17	86	140	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019246922.1	1e-125	PREDICTED: uncharacterized protein LOC109226576 isoform X2
TrEMBL	A0A1J6I9L8	1e-123	A0A1J6I9L8_NICAT; Putative myb family transcription factor
STRING	XP_009802187.1	1e-124	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5516	23	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-35	G2-like family protein