PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00095g05006.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 361aa    MW: 40810.1 Da    PI: 9.747
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00095g05006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.72.1e-0962114255
                      FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtr 55 
                                Yn+YA e GF vrk  ++++ rn+ it+  f Cs+egk+++ +  +e++r+++
  Peinf101Scf00095g05006.1  62 AYNSYAVEKGFGVRKGVKTHN-RNKVITRCLFLCSCEGKSSKLSPYEERKRKSH 114
                               5***************99998.8888**************99988866666654 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.3E-662112IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
IVYASSLQME DLNVENGLSN QEDYTVKDQQ LFTKAHNVCN INKNFVFEIG MKFGSEEESY  60
NAYNSYAVEK GFGVRKGVKT HNRNKVITRC LFLCSCEGKS SKLSPYEERK RKSHPMIEDN  120
LRHFIQSGRK LTDATKNIIG SMIDAGIRTK KAVRYLQNEA SGIENEGFIE QDAHNFIQSY  180
KRNMIKSGDA QILAFAVMTL AANDVDSEKI ARKYLYQANV EITRFQSKLY AEGRDKGVHK  240
FNSIVDPCQD SKDIILDPIK KKGKGKGYKR LKPNIEKGRK KASQKTLKDK VGHPNEQQSF  300
STMAATVNAQ SSSMSQINSS FEFYGESSNT FTQLLTQDST LWTTGYNQNR GLNNMQSNIG  360
I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109113KRKSH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016467903.13e-78PREDICTED: putative protein FAR1-RELATED SEQUENCE 10
STRINGXP_009628526.16e-77(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1726931