PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00089g03010.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 232aa    MW: 26405.4 Da    PI: 4.753
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00089g03010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.58.6e-101442129
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                              +g+WT+eEd +l+++++ +G+g+W+  ++
  Peinf101Scf00089g03010.1 14 KGPWTPEEDHKLIQYIQVHGPGNWRNLPK 42
                              79**********************98766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.4E-14545IPR009057Homeodomain-like
PROSITE profilePS5129411.703951IPR017930Myb domain
SuperFamilySSF466894.38E-9943IPR009057Homeodomain-like
PfamPF002492.8E-81442IPR001005SANT/Myb domain
CDDcd001678.21E-61643No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MGRSPCCDKN GLKKGPWTPE EDHKLIQYIQ VHGPGNWRNL PKNAALVNPE ILKLASTLFL  60
PHTENQELLL LKLQENQLLN PQHIQNSEGP EMLLQKHLQN QLVNSPLHNQ SSIFQHNTNQ  120
IHNQIPEIPN CTQQNVSCSS SQSMQGNMGR YLMDGQIFQE NMMLPPQNYS YTSTPDASEN  180
STFQSLNNSS NQNSQNFSFD TPLSGTEEEK ESYCSNFMKF EIPESLDFDD LL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2447211e-35AC244721.5 Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-58o17 map 10, complete sequence.
GenBankHG9755221e-35HG975522.1 Solanum lycopersicum chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009607100.11e-58PREDICTED: transcription repressor MYB6-like
TrEMBLA0A1S3YPF81e-55A0A1S3YPF8_TOBAC; transcription factor MYB34-like
TrEMBLA0A1S3YWW72e-55A0A1S3YWW7_TOBAC; transcription factor MYB39-like
STRINGXP_009607100.14e-58(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28110.17e-24myb domain protein 41