PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00082g06015.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 464aa    MW: 50361.2 Da    PI: 6.1888
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00082g06015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.59.6e-164993147
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                              r +WT+eE++++v+a k++G   W  I +++g ++t+ q++s+ qk+
  Peinf101Scf00082g06015.1 49 REKWTEEEHKRFVEALKLYGRA-WGQIEEHVG-TKTAIQIRSHAQKF 93
                              789*****************88.*********.************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.33E-164397IPR009057Homeodomain-like
PROSITE profilePS5129419.8324498IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.7E-84594IPR009057Homeodomain-like
TIGRFAMsTIGR015578.2E-164796IPR006447Myb domain, plants
SMARTSM007172.9E-124896IPR001005SANT/Myb domain
PfamPF002498.8E-134992IPR001005SANT/Myb domain
CDDcd001672.82E-95194No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
DQTDGVSQDA SSVISSKVET VATQPRAVTS PRNENIPKVR KPYTIRKQRE KWTEEEHKRF  60
VEALKLYGRA WGQIEEHVGT KTAIQIRSHA QKFFAKVARD SDNNGDGSLN VMDIPPPRPK  120
KKPLHPYPRK MADSPITDQG NSAQPEKSPS PNASPKGKDT CSPVSVLLAS DSDLFEPPVA  180
MRKSAHFAPA SCTLDAHSGT ISRGNDDDCL TANSTIEEEV PVTKVVADSC CPVANPTMKC  240
NMVSRDTSCS GEKLAIEAPV ASIKLFGQTV FVPDAPNLDS ESPENCSSSL SSATEDENKK  300
SNDNLLHSFP PNQANAQFVL PMVPGSMIAP PCLLPQNILD DNSTNIASLP ATMSWCSWYQ  360
DLLYRYISSC SQTAMGSYAP CQGQNSEEPQ REGSSSGSNI GSTTEVDDGK RNCDAVESKC  420
TSRIEKQGCT KGFIPYKRCL AERDGNLSGA IAEKRQEQRA RVCS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1518049e-32AC151804.1 Solanum demissum chromosome 5 clone PGEC475B22, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019224849.10.0PREDICTED: protein REVEILLE 1-like isoform X1
TrEMBLA0A314KU971e-180A0A314KU97_NICAT; Protein reveille 7
STRINGSolyc03g098320.2.11e-175(Solanum lycopersicum)
STRINGXP_009768903.11e-175(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74472127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10113.17e-37MYB_related family protein