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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00074g02007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | MYB_related | ||||||||
Protein Properties | Length: 449aa MW: 47831.4 Da PI: 5.2736 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.5 | 3e-13 | 98 | 142 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++++ +++G g+W++I+r Rt+ q+ s+ qk+ Peinf101Scf00074g02007.1 98 AWTAEEHRLFLQGLEKYGRGDWRSISRNCVVSRTPTQVASHAQKF 142 7***************************999************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51293 | 6.597 | 1 | 61 | IPR017884 | SANT domain |
SMART | SM00717 | 9.5E-4 | 8 | 59 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 2.65E-5 | 11 | 57 | No hit | No description |
SuperFamily | SSF46689 | 9.72E-9 | 11 | 64 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 17.468 | 91 | 147 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 5.01E-16 | 93 | 148 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 8.2E-11 | 95 | 145 | IPR001005 | SANT/Myb domain |
TIGRFAMs | TIGR01557 | 9.6E-17 | 95 | 145 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 6.2E-11 | 96 | 138 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 1.27E-10 | 98 | 143 | No hit | No description |
Pfam | PF00249 | 2.2E-10 | 98 | 141 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 449 aa Download sequence Send to blast |
MSSDQTCNTS SWTKEEDRAF ETALAIYSGD SNQLMKIAAV VPQKSLREII QHYKDLVDDV 60 NDIEAGKVPI PEYTRMQSGS SHRSRLSGAE AARRKGVAWT AEEHRLFLQG LEKYGRGDWR 120 SISRNCVVSR TPTQVASHAQ KFFSRLNDVN KGKRRRSIHD ITTVDTDTIG PSQGQKSDKL 180 IGSYGGQLQW PITDYVTEAF GTGMLSLAGP VTNCSIGTIE GPSAVNPEKF PFGAAVVSGL 240 NSSLPDVDDE FVLGVEDLIT VPADGTSEAW CGGDTRTSPL LSLQPSIAGG TGLYNCPVNS 300 VGNQLGQVFT KQLVGAAELG PVVDTARLPW PNADHLGVHG CPASSIGAKN GFGSTVGAPE 360 GAFSVDSIAF PSIPGNSHGV HPGLNATIKG APEGGFLIDP KTLPSIPAAT RGVYPSLNST 420 IKDDNIFDLE DLFPDHIVRF HEKESIADS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009631817.1 | 0.0 | PREDICTED: uncharacterized protein LOC104121509 isoform X1 | ||||
Refseq | XP_016467664.1 | 0.0 | PREDICTED: uncharacterized protein LOC107790243 isoform X1 | ||||
Refseq | XP_016467729.1 | 0.0 | PREDICTED: uncharacterized protein LOC107790243 isoform X2 | ||||
Refseq | XP_018622197.1 | 0.0 | PREDICTED: uncharacterized protein LOC104121509 isoform X2 | ||||
Refseq | XP_019265247.1 | 0.0 | PREDICTED: uncharacterized protein LOC109242839 isoform X2 | ||||
TrEMBL | A0A1S3ZTK4 | 0.0 | A0A1S3ZTK4_TOBAC; uncharacterized protein LOC107790243 isoform X1 | ||||
TrEMBL | A0A1S3ZTS0 | 0.0 | A0A1S3ZTS0_TOBAC; uncharacterized protein LOC107790243 isoform X2 | ||||
STRING | XP_009631817.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13950 | 11 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 8e-49 | MYB family protein |