PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00066g02042.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HSF
Protein Properties Length: 392aa    MW: 45514.2 Da    PI: 4.4624
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00066g02042.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.21.7e-35111032102
                               HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS
              HSF_DNA-bind   2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 
                               Fl k ye++ede++++lisws ++ nsf+++d  +f++++LpkyFkhsnf+SF+RQLn+YgF+k+++++         weF+++s
  Peinf101Scf00066g02042.1  11 FLLKCYEMVEDESTDSLISWSsDSHNSFIIWDVPKFSSEMLPKYFKHSNFSSFIRQLNIYGFHKSDTDR---------WEFSNDS 86 
                               9********************7777****************************************9999.........******* PP

                               XXXXXXXXXXXXXXXXX CS
              HSF_DNA-bind  86 Fkkgkkellekikrkks 102
                               F kg+k+ll++i r+k+
  Peinf101Scf00066g02042.1  87 FVKGQKHLLKNIVRRKN 103
                               **************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.102.7E-357101IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467858.71E-327101IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004159.9E-517101IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004474.1E-3011101IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.7E-171134IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.7E-175062IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.7E-176375IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MVKSFENVAP FLLKCYEMVE DESTDSLISW SSDSHNSFII WDVPKFSSEM LPKYFKHSNF  60
SSFIRQLNIY GFHKSDTDRW EFSNDSFVKG QKHLLKNIVR RKNLGVVQKK PSQPEETKSC  120
TSQENKSLEL WKEVENLKID KDELTQELIK LKQHQQSSES KLILLRDQLK GMEKHQQQML  180
SFIVMAMQSP SFLVQFFQPK ENNWRMTENG SNILSEIEDD CEDMPSDRAI VRYHPPAHET  240
VEPLCAEPEP ALDAKKPMEL DLSSDELRDL FSNVDFFRGL MDEKHEQLRP FESIPLTLPE  300
LPDDDNMLEQ LLSFFPRTDD KEDEVLDHES CSHAGMEADS SVQPMECGTF EGPGEQFCGI  360
EDKNMEMALL ESRPDNSGNM DRLTEKMELT KF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B4e-22710125129Heat shock factor protein 1
5d5v_B4e-22710125129Heat shock factor protein 1
5d5v_D4e-22710125129Heat shock factor protein 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006340011.10.0PREDICTED: heat stress transcription factor A-8
TrEMBLM1BH270.0M1BH27_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000450890.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA122352222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67970.13e-78heat shock transcription factor A8