PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00062g05005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 830aa    MW: 93730.7 Da    PI: 6.2763
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00062g05005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.64e-12276322354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               ++h + Er+RR ++N+++  Lr++ P++      K++ a+i++ A++YI++L
  Peinf101Scf00062g05005.1 276 TKHFATERQRRVHLNDKYKALRSMHPNP-----SKNDRASIVKDAIDYINEL 322
                               78*************************9.....7***************998 PP
2HLH28.72.5e-09645690454
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               +h + E+ RR +  ++f+ Lr+l+P++      K++ a+i   A+ YI++L
  Peinf101Scf00062g05005.1 645 KHHASEKIRRVHFSDKFQALRSLIPNP-----SKNDRATIIADAIGYINEL 690
                               7999**********************9.....7***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.37E-14270340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.691273322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-9276322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-11276327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.22E-10276326No hitNo description
SMARTSM003533.5E-8279328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.55E-13640704IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.887641690IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.5E-7645690IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.49E-8645691No hitNo description
Gene3DG3DSA:4.10.280.102.6E-12645710IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-4647696IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 830 aa     Download sequence    Send to blast
MYVQSACYDP TNVQHEGVLT EDVFGIEEHH NTYHNSTQQA DAAVVAAAAM EMELQQQLNL  60
ELEQCYNTHN NNMQHLVHES NNQGLSCDQS NNWGEMNFPP YQNQEDNNNS NNFQHATHDM  120
QNVQQQNFPE APYLPTPPDL LNMFPLPSSS ISFANNTTHQ SSNLLTSLGL LGDISIPSTD  180
GASTSSAVYD PSLLPLNLPP QPPLLRELFH SLPHGYGLRN LRSTSSNFFN GMDQEREGSG  240
GLYQDGEGIR PFDNGIFEFS ADMNGIVKNK DGNKDTKHFA TERQRRVHLN DKYKALRSMH  300
PNPSKNDRAS IVKDAIDYIN ELKREVNELK LMVEKKRCNR DRIKRQKTEG GNSLDGTDAK  360
QMDEVDQSFN GNSLRSSWLQ RRSKNTEVDV RIVDDEVTVK LVQQKRINCL LFASKVLDEL  420
QLDLHHVAGG LIGDYYSFLF NSKICEGSTV YASAIAKKLI EVVDIQMYQG IEEKGMFQNH  480
LTTCGTNFTM GVELQQQHQL NLQMGHFHST LNCNIDQEFG HEPNVTGLSY GHVNYQQLDF  540
NPNHQLQNLH NTSSLGLLAS TSTANLFYDP QLMPNMNICT TQQPTLFKDL FHHGSYGLGT  600
SSLFNHGVAE AELPSGLYHD GSNFEFSTGD ITSVAKKREA GKDIKHHASE KIRRVHFSDK  660
FQALRSLIPN PSKNDRATII ADAIGYINEL KMTVNYLKKQ VVEKKERIKR QRTEDGFNIE  720
AENDQLNKLY CNGRSSWLQK KTKNTEVDVR IINDEVTVKL VQQKRMNCLL FVSKALDELQ  780
LDLHHCSGGL IGDHYSYLFN SKICRGSTLY ASAVANKVIE VLEQEEHAAI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754401e-142HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009788149.10.0PREDICTED: transcription factor bHLH91-like
RefseqXP_016475217.10.0PREDICTED: transcription factor bHLH91-like
TrEMBLA0A1S4AEW60.0A0A1S4AEW6_TOBAC; transcription factor bHLH91-like
TrEMBLA0A1U7XMH40.0A0A1U7XMH4_NICSY; transcription factor bHLH91-like
STRINGXP_009788149.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26962351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31220.12e-74bHLH family protein