PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00049g01018.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family G2-like
Protein Properties Length: 413aa    MW: 46940.1 Da    PI: 5.4377
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00049g01018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.32.6e-31231285155
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               k+r+rW+++LH+rFve+v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR+
  Peinf101Scf00049g01018.1 231 KTRIRWNQDLHDRFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRT 285
                               68****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-27229286IPR009057Homeodomain-like
SuperFamilySSF466891.51E-15230285IPR009057Homeodomain-like
TIGRFAMsTIGR015575.6E-23231286IPR006447Myb domain, plants
PfamPF002494.8E-7235284IPR001005SANT/Myb domain
PfamPF143794.2E-20315361IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MSIPQNYEFA SEYNLEFQQI DQQKASPYVG FCFQPETSAQ NGCQQQLLQS FLPMIDSSSR  60
NVISRIESPP SAFFATDQRY MGLTQYEYQD NTYQLSKNHD PQQCGNGFLV DSPAQARADP  120
DFSNVSVPSF IRSQFSSSQP LSPEGPYGNT YCNLSEKERI LLLKSRLLKD FDTSNGQPSM  180
PFLGNQDYSL PQNLCHFNLV HPMQQSEVPS GSQSTYNFNN SGCSGGSLSN KTRIRWNQDL  240
HDRFVECVNR LGGADKATPK AILKLMDSEG LTIFHVKSHL QKYRTAKSIP ESIEGKSEKT  300
DSPNDMTQID NKTGMQIKEA LHMQLEVQKR LHEQLEIQRK LQMRIEEQGK QLKELFDQQQ  360
KRTRSLLETQ NTNSSSPNDP FTLHEDEVFV VESFDDTHFP SQISYNGTTT TSV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-22231287258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-22231287258Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-22231287157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-22231287157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-22231287157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-22231287157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-22231287258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-22231287258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-22231287258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-22231287258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-22231287258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-22231287258Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2445803e-31AC244580.4 Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-40g6 map 10, complete sequence.
GenBankHG9754493e-31HG975449.1 Solanum pennellii chromosome ch10, complete genome.
GenBankHG9755223e-31HG975522.1 Solanum lycopersicum chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016483648.10.0PREDICTED: uncharacterized protein LOC107804295 isoform X2
SwissprotQ0WVU36e-71PHL5_ARATH; Myb family transcription factor PHL5
TrEMBLA0A1S4B4E00.0A0A1S4B4E0_TOBAC; uncharacterized protein LOC107804295 isoform X2
STRINGXP_009623150.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24912458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.13e-71G2-like family protein