 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peinf101Scf00047g01010.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 205aa MW: 23085.2 Da PI: 7.7959 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf00047g01010.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.6 | 1.2e-19 | 72 | 126 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Lee F++n++++ +++e LA++l+L+ rqV vWFqNrRa+ k
Peinf101Scf00047g01010.1 72 RKKLRLTKEQSFLLEESFRQNHTLNPKQKEALAMQLKLKPRQVEVWFQNRRARSK 126
78889************************************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 205 aa
Download sequence Send
to blast |
MPGSSTCLEL TISIPGSSSS SSFPSSGEGG GYLMRDLDIN QVPSGGKINE EESMEEEEEE 60
ESCINGIGGP PRKKLRLTKE QSFLLEESFR QNHTLNPKQK EALAMQLKLK PRQVEVWFQN 120
RRARSKLKQT EMECEYLKRW FGSLTEQNRR LKREVEELRS MKVGAPTVLS PHSCQPLPAS 180
TLSMCPHCER VTTTVARGES KINLN
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 120 | 128 | RRARSKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
