PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00044g20015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | bHLH | ||||||||
Protein Properties | Length: 500aa MW: 55156.3 Da PI: 5.1523 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.7 | 2.4e-09 | 316 | 364 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Peinf101Scf00044g20015.1 316 NSHSLAERVRREKISERMKYLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 364 58*************************9....677*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.92E-10 | 311 | 368 | No hit | No description |
SuperFamily | SSF47459 | 2.62E-17 | 311 | 382 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.51 | 313 | 363 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.2E-17 | 314 | 380 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.0E-6 | 316 | 364 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.2E-10 | 319 | 369 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 500 aa Download sequence Send to blast |
MDLSSKNDIE QQKRNDDAMN FQSSNMSLDW QLSGSNFPNS NPLVDSICPT IWDRPTNSPN 60 LSYYGNNDVQ INPTSTMNPH EIVAMLKGGM FVPPSLGMPP QLPADPGFIE RAARFSCFSA 120 GSLSDMMNPF SVPESMKPCY RGLAETWRPE EVSARNGLNS PPAVNPQKQQ MGNEVESSKD 180 VSLPNEHGTN EESPLKNEKR NDNIARSQDE GKESVGLLGN ESDEAECSGR QEEMEGAGSR 240 KRKRYGQETE LDQMKRVKQP SAERAQDQTE TQKGEQNLKS TASKPGGNNG KQWSQASDPP 300 KEDYIHVRAR RGQATNSHSL AERVRREKIS ERMKYLQDLV PGCNKVTGKA VMLDEIINYV 360 QSLQRQVEFL SMKLATVNPQ LDFNIDGLLA KDILQSRAGP SSALAFPPDM TIPFTSLHAL 420 QSGLLQSGFP GMGYRTDASS RSINPHFASM SGGYKDPSSQ VPNAWDDQLH NVVDMGFNSN 480 VSLNNQDLSS LPPGQMKAEP |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00660 | PBM | Transfer from Pp3c6_9520 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019228486.1 | 0.0 | PREDICTED: transcription factor bHLH49-like | ||||
TrEMBL | A0A314KMY7 | 0.0 | A0A314KMY7_NICAT; Transcription factor bhlh49 | ||||
STRING | XP_009776786.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2871 | 21 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.3 | 1e-100 | bHLH family protein |