PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00032g28030.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bZIP
Protein Properties Length: 214aa    MW: 23193.5 Da    PI: 10.3083
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00032g28030.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.1e-10168208545
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                               k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Peinf101Scf00032g28030.1 168 KSLRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQEL 208
                               778*************************9887777766655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502179.611166214IPR004827Basic-leucine zipper domain
PfamPF001704.5E-7168208IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.65E-6168210No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-7170207No hitNo description
PROSITE patternPS000360171186IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MASTIGTQGN RSGTTGMPSF ISQIPASNPM GTEGNNRNTS RMSEFGVLEQ YLGFRIGDGA  60
NVNGTAGLDV SGTINKTLAP SNTSFSAAIP VSQTLQLQKG PQANLVSRFG THHENWGESN  120
MADSSSRTDT SNDMDGDDKN QRIETGQSGG IAASDSSDKS KEKVLDQKSL RRLAQNREAA  180
RKSRLRKKAY VQQLENSRLK LSQLEQELQR ARQQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ3869462e-83GQ386946.1 Capsicum annuum leucine zipper transcription factor TGA (TGA) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001312268.11e-111TGACG-sequence-specific DNA-binding protein TGA-2.1
RefseqXP_009602601.11e-112PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like
RefseqXP_009759888.11e-111PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1
SwissprotO241601e-112TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A1S3Z3861e-110A0A1S3Z386_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A1U7V0F81e-110A0A1U7V0F8_NICSY; TGACG-sequence-specific DNA-binding protein TGA-2.1
STRINGXP_009759888.11e-110(Nicotiana sylvestris)
STRINGXP_009602601.11e-112(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2045522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.24e-21TGACG motif-binding factor 6