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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf00023g02011.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
CO-like |
Protein Properties |
Length: 407aa MW: 46813.2 Da PI: 5.4325 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf00023g02011.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 30.6 | 6.9e-10 | 16 | 59 | 3 | 40 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
+r C+++ +k+++++C ++ +lC++C ++ H+ H++v
Peinf101Scf00023g02011.1 16 ARACDNCIRKRARWYCAADDAFLCQSCDSSVHSAnplarrHERV 59
578*****************************667888888876 PP
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2 | CCT | 68.4 | 1.8e-23 | 353 | 396 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea++lRY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a
Peinf101Scf00023g02011.1 353 REARVLRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 396
9*****************************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 407 aa
Download sequence Send
to blast |
MSSKKKLANA VGAKTARACD NCIRKRARWY CAADDAFLCQ SCDSSVHSAN PLARRHERVR 60 LKAASFKSSN EFPNLESSNS VTSWHNGFTR KARTPRNGKN SRKVKSIDEE EIRNPIHLVV 120 PEILSDENSH DENEEQLLYR VPTFDPNNGN EYSNEMKNDF SDIDMNRFHG MPNIQTVKEL 180 EEFAADVESL LGKGLDDEES FNYMEELGFM EDCVKVENEG EVEIDMASTS YYDNQVDYSE 240 IDMAGETFEL KFDCDSSIIS FEEDINKGEV GVVMKNNIDD GKSRRSSNIL LNLDYGGVLN 300 AWDDQRSPWT TGERPELDFN DCWPVCMGNC GKYHNYEDME ILKGHGPVVD EGREARVLRY 360 REKRRTRLFS KKIRYEVRKL NAEKRPRMKG RFVKRANFAA VPIPFHK
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 363 | 379 | RRTRLFSKKIRYEVRKL |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G25440.1 | 7e-97 | B-box type zinc finger protein with CCT domain |