PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00019g07002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | bHLH | ||||||||
Protein Properties | Length: 177aa MW: 20181.3 Da PI: 4.8345 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.4 | 0.00014 | 23 | 60 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + Er+RR+++N ++ Lr+l+ k +i + A+ YI++Lq Peinf101Scf00019g07002.1 23 IPERNRREKLNARLLALRSLMTKE-----------TIITDAITYIRELQ 60 67*******************998...........89999999999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.13E-6 | 15 | 60 | No hit | No description |
SuperFamily | SSF47459 | 4.19E-10 | 16 | 75 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.6E-7 | 17 | 75 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence Send to blast |
MTIKCDKKQN DGEVREYKSK NLIPERNRRE KLNARLLALR SLMTKETIIT DAITYIRELQ 60 MNVNNLTEQL LEMDATLGEE VVPKKEEILD KWDIEPEVQV AQISATKLWI KIVCQKKRGG 120 FTELIEAMNF LGFDLNDTSV TSSNGALLVT SSVEVVQGGV IETQQIREFL LEIIRGI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009597290.1 | 7e-85 | PREDICTED: transcription factor DYT1 | ||||
TrEMBL | A0A1U7WGU4 | 4e-83 | A0A1U7WGU4_NICSY; transcription factor DYSFUNCTIONAL TAPETUM 1-like isoform X1 | ||||
STRING | XP_009597290.1 | 3e-84 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9107 | 16 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21330.1 | 3e-39 | bHLH family protein |