PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00013g04003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 354aa    MW: 39730.9 Da    PI: 5.6096
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00013g04003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-102803201055
                               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Peinf101Scf00013g04003.1 280 RKRREKINERLRILQNLVPNG-----TKVDISTMLEEAVNYVKFLQ 320
                               9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.224270319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-14272335IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.5E-13275333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-11276325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.92E-11279324No hitNo description
PfamPF000101.0E-7280320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MEPIMGAFFD EEWESLSKLF STELHVDHGL FSTNEHHEAN GNNFNYFSQE SSITSSGSDG  60
MFLSNDPSHE HLQHYSNNID IDVNNFLQVA INNNPDDQSI DFFAMDNKTL ENVHVNSDDT  120
RYMSSQEEMV CDHQLVNAGI ISPVSSKEMQ LKRKFDKVSP QSSARDKKVK QELPENPKKK  180
SRGSQDAQKN KKKAQPKGKK NQKIITQTNN EEGDQEETNT EANQNGQSSS CCSSEDDSNA  240
SQELNGGAIS SKSKGSALNL SGKSRASRGA ATDPQSLYAR KRREKINERL RILQNLVPNG  300
TKVDISTMLE EAVNYVKFLQ LQIKLLSSDE HWMYAPLAYH GMDIGLYQQM LPSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1279284RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2575129e-53KP257512.1 Salvia miltiorrhiza clone 79 basic helix-loop-helix transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009629598.11e-153PREDICTED: transcription factor bHLH85-like
TrEMBLA0A1S4C8251e-151A0A1S4C825_TOBAC; transcription factor bHLH85-like
STRINGXP_009629598.11e-153(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.18e-53bHLH family protein