 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peinf101Scf00009g02007.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
NAC |
| Protein Properties |
Length: 397aa MW: 45412.4 Da PI: 7.9709 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf00009g02007.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 158.9 | 2e-49 | 50 | 175 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
+pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkat
Peinf101Scf00009g02007.1 50 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKAT 133
79***************************.89***************8778899******************************* PP
NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
g d+ + s++++ +glkktLvfy+g+apkg +++W+m+eyrl
Peinf101Scf00009g02007.1 134 GADRMIRSESSRPIGLKKTLVFYSGKAPKGIRSSWIMNEYRL 175
****************************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MAIAPFTSMS QSSQQQQQDD SSSNVVNHIN NNKKDHHDDN NDEHEHDMVM PGFRFHPTEE 60
ELVEFYLRRK VEGKRFNVEL ITFLDLYRYD PWELPALAAI GEKEWFFYVP RDRKYRNGDR 120
PNRVTTSGYW KATGADRMIR SESSRPIGLK KTLVFYSGKA PKGIRSSWIM NEYRLPHHET 180
ERLQKAEISL CRVYKRPGVE DHPSLPRSLP TTKASSSSSS RAHHSIKKNH HPQVVQQDPF 240
STNYGGQSSH QIDEKLSAEN SASSTSTDHH HQVITSLGLS NSHQITTLTA STMTPFSSLI 300
SPNNTTAVDD LHRLVNFQNQ LQNHQHFQNI SNQHINPAAL ATHQFTQLLQ PQVLPQPNLL 360
FQGSLQSALI SDRLWDWNSV QPDASCKDYQ PNNSPFK
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-55 | 51 | 196 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-55 | 51 | 196 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-55 | 51 | 196 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-55 | 51 | 196 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 2e-55 | 51 | 196 | 19 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 2e-55 | 51 | 196 | 19 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that acts as a floral repressor. Controls flowering time by negatively regulating CONSTANS (CO) expression in a GIGANTEA (GI)-independent manner. Regulates the plant cold response by positive regulation of the cold response genes COR15A and KIN1. May coordinate cold response and flowering time. {ECO:0000269|PubMed:17653269}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Circadian regulation with a peak of expression at dawn under continuous light conditions (PubMed:17653269). Circadian regulation with a peak of expression around dusk and lowest expression around dawn under continuous light conditions (at protein level) (PubMed:17653269). {ECO:0000269|PubMed:17653269}. |
