PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13284910g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NF-YA
Protein Properties Length: 115aa    MW: 12391.3 Da    PI: 9.9987
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13284910g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA42.71.8e-137293658
                    CBFB_NFYA 36 kpylheSRhkhAlrRpRgsgGrF 58
                                 +pylheSRh+hA+rR+R+sgGrF
  Peinf101Ctg13284910g00001.1  7 QPYLHESRHQHAMRRARASGGRF 29
                                 89********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5115218.213132IPR001289Nuclear transcription factor Y subunit A
PfamPF020455.2E-11729IPR001289Nuclear transcription factor Y subunit A
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    Send to blast
SPVLILQPYL HESRHQHAMR RARASGGRFA RKTDGDASKG TGSGSAFSSQ SVSSSGSEPL  60
QFNAADVQKR QENGRLAELQ HSYSNGSSYG NQSSFQESKD ESQSAESREG GSLRK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4897591e-172AM489759.1 Petunia x hybrida partial mRNA for YA4 (nf-YA gene).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019251747.13e-51PREDICTED: nuclear transcription factor Y subunit A-1-like
TrEMBLA5PGU76e-69A5PGU7_PETHY; YA4 (Fragment)
STRINGXP_009624416.11e-44(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31112248