PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf06118g00001.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 175aa    MW: 20107.4 Da    PI: 5.2218
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf06118g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.7e-103575954
                              HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                               r RR+ri ++f  L++l+P        K++ +++Le+A++Y+k L
  Peaxi162Scf06118g00001.1 35 ARERRHRISDRFKILQSLVPGG-----SKMDTVTMLEEAIHYVKFL 75
                              699*****************95.....5****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.1482675IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.28E-133186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.98E-133279No hitNo description
SMARTSM003532.4E-123281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-123279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-73575IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MDQNSSCLSS SSKINGKEKK KKVVKLSTDP QSVAARERRH RISDRFKILQ SLVPGGSKMD  60
TVTMLEEAIH YVKFLKTQIW LHQTMINLVD DQDPTYDQLL MAQSTNFPNY YPNEIVGYPL  120
VENISQLNNS FEQLQVPSYN NYDAFQQVGF SFSDHGDQFQ GEENNNISGD AFMYY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009609302.12e-72PREDICTED: transcription factor bHLH140-like
TrEMBLA0A1J6I9B01e-68A0A1J6I9B0_NICAT; Transcription factor bhlh140
STRINGXP_009609302.18e-72(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117141723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01310.18e-31APRATAXIN-like