PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf02754g10013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | TALE | ||||||||
Protein Properties | Length: 687aa MW: 77359 Da PI: 6.9598 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.5 | 1.1e-08 | 492 | 523 | 23 | 54 |
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRak 54 ryps++++ L++++gL+++qV++WF N R + Peaxi162Scf02754g10013.1 492 RYPSEADKHLLSRQTGLSKNQVSNWFINARVR 523 7*****************************88 PP | |||||||
2 | BELL | 88.4 | 7.9e-29 | 299 | 381 | 1 | 72 |
BELL 1 erqelqkkkakLlsllee...........VdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+ e q++k kLls+l+e Vd rY +y+eq+q++++sF+ ++g+g+a pYt+lA+ka+SrhFrc+kdai+ q+ Peaxi162Scf02754g10013.1 299 EKSEYQRRKIKLLSMLDEacnffilfsilVDARYTRYCEQMQAMVNSFDSMIGYGAASPYTALAQKAMSRHFRCIKDAIVAQL 381 57899************988888888888999************************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 1.4E-48 | 230 | 379 | IPR006563 | POX domain |
Pfam | PF07526 | 2.8E-46 | 235 | 378 | IPR006563 | POX domain |
Gene3D | G3DSA:1.10.10.60 | 1.0E-4 | 434 | 457 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 2.0E-4 | 463 | 531 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 6.42E-12 | 490 | 534 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 1.00E-8 | 492 | 528 | No hit | No description |
PROSITE profile | PS50071 | 10.851 | 492 | 527 | IPR001356 | Homeobox domain |
Pfam | PF05920 | 3.8E-12 | 493 | 523 | IPR008422 | Homeobox KN domain |
Gene3D | G3DSA:1.10.10.60 | 5.4E-17 | 493 | 533 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 687 aa Download sequence Send to blast |
MLRVQGYESL PPPPPQQVEV EPPATVYDGG GMLTEIISYP SAWRKSATEM LDDQIQASYR 60 PWPQKEQQQQ LPPTINDVEL PLMNPHMKVS SPPRSSSSLH MLLPNSADTN SLLHHQGFHL 120 LNSATAEPPS QFTWVPGSGS GEDNSTRIGR VVDGQGLSLS LSRNFEAAAK LEDLRIGNGG 180 IYLQNNQGLL GINNNNHHQH QLLHSGVIMD HRTPQTSHQV HVGYAAAASP RITNVLRNSR 240 YVKATQELLE EFCCVGRGNF KNQRVKKCDD ENPNDSENNR DVGSSSSKDI NHPPLSAAEK 300 SEYQRRKIKL LSMLDEACNF FILFSILVDA RYTRYCEQMQ AMVNSFDSMI GYGAASPYTA 360 LAQKAMSRHF RCIKDAIVAQ LKQTCKFLGE KDVAGSSGLT KGETPRLKML DQKLRQQKAL 420 HQMGMLDSDA WRPQRGLPER SVNVLRAWLF EHFLHPYALH SLYFSFLLSF LLLFLLSLEQ 480 EIYLCHAGIV FRYPSEADKH LLSRQTGLSK NQVSNWFINA RVRLWKPMVE EMYQQETKEE 540 ETDQEEENHK EKQESAAQTP MHYDKTTSPT TTTIPLSSVR SEFNANERDT SKNIINYRQY 600 TLGNQQLVML PNQQLGQDDN SAASSTTHDV STTVNRYIMA DAVDLGVSNG TFGSQQAGDV 660 SLTLGLRHSE NVPRKTTQFQ LRDFGAY |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009773433.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 4 | ||||
Refseq | XP_016504574.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 4 | ||||
TrEMBL | A0A1S4CUA5 | 0.0 | A0A1S4CUA5_TOBAC; BEL1-like homeodomain protein 4 | ||||
TrEMBL | A0A1U7W4A1 | 0.0 | A0A1U7W4A1_NICSY; BEL1-like homeodomain protein 4 | ||||
STRING | XP_009773433.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6072 | 17 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36870.2 | 1e-116 | BEL1-like homeodomain 2 |