PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf02167g00001.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 293aa    MW: 33457.3 Da    PI: 5.2738
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf02167g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.13.5e-1951403128
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevi.kevdiykv.ePwdLpk........kvkaeekewy.fFskrdkkyatgkrknr 76 
                                GfrF+P+d+e +  +L + +++++l+   +i ++vd+y   ePw++ +          +ae+ + y fF+++ k++++gkr +r
  Peaxi162Scf02167g00001.1   5 LGFRFRPSDSERL-AFLLRFITKHDLRDRGFIsTNVDVYGKeEPWEIYHrgipcgggDGEAEDCSSYrFFITKLKTKNNGKRFKR 88 
                               6**********99.8899999999988878761566*996549****7446776654222233333449999999999******* PP

                       NAM  77 atksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                                + +g+Wk+  ++k v+++k+ ++g kk++ + ++  + ++   +W+m+ey++
  Peaxi162Scf02167g00001.1  89 EVGKGTWKQD-NTKLVHNEKSVVIGSKKSMSYVNKkLDTEALGGKWLMKEYEF 140
                               ********76.5689999999************65256777799*******85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.76E-193163IPR003441NAC domain
PROSITE profilePS5100522.1173163IPR003441NAC domain
PfamPF023654.0E-116139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MEFELGFRFR PSDSERLAFL LRFITKHDLR DRGFISTNVD VYGKEEPWEI YHRGIPCGGG  60
DGEAEDCSSY RFFITKLKTK NNGKRFKREV GKGTWKQDNT KLVHNEKSVV IGSKKSMSYV  120
NKKLDTEALG GKWLMKEYEF SKVILKQFPE DCKDYVLCAI RKKPSTSSST TTTMLNSSAS  180
SVRDQETEVT NTTSVDNSWA MGSSSEQYSQ SKTMTLLNFQ ESHDAMGSMV LTDSSTVVEE  240
TSYFGQHSGY DIQPAATVHV ESETVQTMFQ NDFNEMPDYQ WDDFDVREFI NGI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_009631312.11e-60(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1632426
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.17e-11NAC domain containing protein 3