PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01324g00211.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 367aa    MW: 41872.4 Da    PI: 4.9366
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01324g00211.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.94.9e-20121413128
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeek.ew.yfFskrdkkya..tgkrknratksg 81 
                                G+rF+P+deel  +yL k v g ++e++++ ++vd+y   +P d+  + + ++e  ++ yfF+k +k +   +++ k+r +  g
  Peaxi162Scf01324g00211.1  12 LGIRFRPNDEELT-RYLMKFVCGMPFECHHIRRDVDLYGNkKPCDFFdELFPEGEPtDVnYFFAKLKKLSDrcKKNFKRRLACGG 95 
                               69**********9.9*************8888999**97549****63433333333445999999887763335556668899* PP

                       NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               +Wk + + k+v +kkg+l+glk++L f +g++++ e+  W m+ey+l
  Peaxi162Scf01324g00211.1  96 TWKGQDSGKDVRNKKGSLIGLKRSLRFQDGNSSD-ENIVWNMKEYSL 141
                               ****************************998887.89********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-197168IPR003441NAC domain
PROSITE profilePS5100522.08110168IPR003441NAC domain
PfamPF023653.0E-1313141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MMSNTCSPNS MLGIRFRPND EELTRYLMKF VCGMPFECHH IRRDVDLYGN KKPCDFFDEL  60
FPEGEPTDVN YFFAKLKKLS DRCKKNFKRR LACGGTWKGQ DSGKDVRNKK GSLIGLKRSL  120
RFQDGNSSDE NIVWNMKEYS LSDAILKELK QRGKIQHEDI VLCRIKRKLA VHEKKRSSSS  180
YSDQQVPVEI ENNKIVVAEQ PIMQLGYCVE GENNYHMDSS CVPLSCLENN NNSEEIITSR  240
FEFVSEHPIV QIERLDDQTD HINSCVPVFN FDQIEFEHEK ANVPSLEEAL SGLKTLLNKD  300
DAYSSLLGLL TSTEELFQFP DVAEGGAYSV VQPMVQDTTN IIMSANEDMN NSTADQVCCE  360
VQTVNIL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18390KKNFKRRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13516214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.16e-15NAC domain containing protein 2