PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01184g00135.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HB-other
Protein Properties Length: 295aa    MW: 33641 Da    PI: 4.8185
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01184g00135.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox148.6e-052322671454
                               HHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                  Homeobox  14 eLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                               eL+++F++     +e++++L +++gL+ +qV +WF N+R +
  Peaxi162Scf01184g00135.1 232 ELKQEFKQ-----EEDKAKLVQETGLQLKQVNNWFINQRKR 267
                               55555554.....68999*********************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM012551.3E-1566110IPR005540KNOX1
PfamPF037906.2E-1669109IPR005540KNOX1
SMARTSM012563.4E-23120175IPR005541KNOX2
PfamPF037916.0E-18124174IPR005541KNOX2
Gene3DG3DSA:1.10.10.601.6E-14218273IPR009057Homeodomain-like
PROSITE profilePS500719.426219271IPR001356Homeobox domain
SMARTSM003898.8E-4219275IPR001356Homeobox domain
SuperFamilySSF466892.91E-8229274IPR009057Homeodomain-like
CDDcd000862.45E-8230272No hitNo description
PfamPF059201.4E-10240267IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MAFHHFATTS SPAVGPDNDD VSEQISFSKK LSEQYLGERD EVMNNNDNNN NNISNNDQSD  60
NYWEKEKHKA DIMNHHLCDQ LLSAHVACLR IATPVDQLPR IDEQLAQSQN LVAKYYVVGQ  120
SQRPIDDKDL DQFMTHYVLL LSSFKEQLQQ HVRVHAMEAV MACWELDQSL QNLTGVAPGE  180
STGATMSDDD DDQAECDTTY YSGGLDGPDN TGFGPLVPTE SERFLMERVR QELKQEFKQE  240
EDKAKLVQET GLQLKQVNNW FINQRKRNWH TNASSSTQKS KRKSAGEKSR NDHFT
Functional Description ? help Back to Top
Source Description
UniProtMay have a role to play in formative events in ovule and embryo morphogenesis.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019243340.11e-153PREDICTED: homeobox protein knotted-1-like LET12
SwissprotO223001e-118LET12_SOLLC; Homeobox protein knotted-1-like LET12
TrEMBLA0A1J6IIA21e-151A0A1J6IIA2_NICAT; Homeobox protein knotted-1-like let12
STRINGXP_009775738.11e-151(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2550622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11060.11e-108KNOTTED1-like homeobox gene 4