PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01141g00013.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 239aa    MW: 26915 Da    PI: 8.346
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01141g00013.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.0001589111123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++C++C k+F ++  L  H++ H
  Peaxi162Scf01141g00013.1  89 FECQYCFKHFANSQALGGHQNAH 111
                               89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.604.8E-487115IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576676.48E-687116No hitNo description
PROSITE profilePS5015711.26189116IPR007087Zinc finger, C2H2
PROSITE patternPS00028091111IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009736Biological Processcytokinin-activated signaling pathway
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010026Biological Processtrichome differentiation
GO:0048510Biological Processregulation of timing of transition from vegetative to reproductive phase
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MAKDIASIFL SPSSHSGENE STSKSCVENK RLKLFGVELD NKNNYYVSVP NKLGRKESVG  60
DGDHESVNSS SSTVSYDKVN KELEEIKKFE CQYCFKHFAN SQALGGHQNA HKKERMKKKR  120
LQLQARKASL SCYLQPFQNS NIINYQFYDP SLFGNSDQFT VYDESQISFC PYDQDGMYMP  180
AAKVPFQQDS CTFTLTHGER SRGNYTNPAE VMKPSSTLPN AASKQNSKSL DLQLGLSLH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016477028.11e-105PREDICTED: zinc finger protein 5-like
TrEMBLA0A1S4AKS91e-103A0A1S4AKS9_TOBAC; zinc finger protein 5-like
STRINGXP_009611707.11e-104(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51362130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.11e-16zinc finger protein 5