PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01022g00329.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 278aa    MW: 31177.2 Da    PI: 8.7408
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01022g00329.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.00014154176123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ykC++C+k+ +++  L +H   H
  Peaxi162Scf01022g00329.1 154 YKCEICNKVLKSSQALGSHKTIH 176
                               9******************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576677.21E-5330No hitNo description
PROSITE profilePS5015710.367431IPR007087Zinc finger, C2H2
PfamPF139122.1E-8426IPR007087Zinc finger, C2H2
SMARTSM003550.025426IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280626IPR007087Zinc finger, C2H2
SuperFamilySSF576672.15E-9152224No hitNo description
PfamPF139127.7E-6154178IPR007087Zinc finger, C2H2
PROSITE profilePS501579.577154181IPR007087Zinc finger, C2H2
SMARTSM003550.022154176IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280156176IPR007087Zinc finger, C2H2
PfamPF139122.6E-9201224IPR007087Zinc finger, C2H2
PROSITE profilePS501579.203202224IPR007087Zinc finger, C2H2
SMARTSM003550.17202224IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280204224IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MEKHKCKLCS RKFSSGKAMG GHMRSHLMNL PLPPKTPPQK QDSGDPEFLD AGSSVVHDKE  60
SESESTKKPT RRRSKRIRRM FVAEETIKNH QDENKEEKSA EFEPVMSSFS DNSPEEDIAF  120
CLMMLSKDVW RTNTNSSYTM SNVREKQGQQ GKCYKCEICN KVLKSSQALG SHKTIHKKTN  180
LQEVLQEKER KLRLKNVDDK VHECPFCGKI YGSGQALGGH KRSHILSLST TASSSSKVGD  240
SLVDSSSANK FPNGFIDLNM PAPMEDEDFS QQEVSAVS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009615913.11e-110PREDICTED: zinc finger protein ZAT9
RefseqXP_016499332.11e-110PREDICTED: zinc finger protein ZAT9-like
TrEMBLA0A1S4CDN71e-109A0A1S4CDN7_TOBAC; zinc finger protein ZAT9-like
STRINGXP_009615913.11e-110(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10952480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.11e-43C2H2-like zinc finger protein