PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01007g00110.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 274aa    MW: 31538.2 Da    PI: 5.0627
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01007g00110.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.41e-21141492128
                       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratks 80 
                               p+GfrFhP+d e++ +yL   v++++l+l++  ++ +d+y   ePw++ +++k+    +++  y  ++ +k +a +k+ +r++ +
  Peaxi162Scf01007g00110.1  14 PMGFRFHPKDIEVM-QYLLGFVTNNPLPLQNElMQFADLYADkEPWQIFQACKShdciNKNTRYIITQLKKVKADKKNVSRTVGK 97 
                               89**********99.9**********99977757777*997559****754444334455677********************** PP

                       NAM  81 gyWkatgkdkevlskkgelvglkktLvfy....kgrapkgektdWvmheyrl 128
                               g+Wk + + kev +++g+lvg  k++ +y    + ++ + ++ +W+m ey+l
  Peaxi162Scf01007g00110.1  98 GTWKPQDRGKEVRDTSGRLVGFVKSIKYYpskkSSSTDNNNNGEWLMREYSL 149
                               *****************************765434555667999******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-238156IPR003441NAC domain
PROSITE profilePS5100522.29713169IPR003441NAC domain
PfamPF023659.6E-1314149IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MAVHSQTVCF SRWPMGFRFH PKDIEVMQYL LGFVTNNPLP LQNELMQFAD LYADKEPWQI  60
FQACKSHDCI NKNTRYIITQ LKKVKADKKN VSRTVGKGTW KPQDRGKEVR DTSGRLVGFV  120
KSIKYYPSKK SSSTDNNNNG EWLMREYSLA DNYLNAPQIK NKGSRRRKKK GDNNEEVNND  180
GDVEDDVQEY INSVLQEDHV QEDVNGQSND MVLLADHIEE NNNNEFYMID GENIGVSALL  240
GSADQVQVQN QDHQFLLMWS SPDDIDLDTI SYCL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019238684.17e-78PREDICTED: NAC domain-containing protein 30-like
TrEMBLA0A1S4AKD43e-73A0A1S4AKD4_TOBAC; NAC domain-containing protein 30-like
STRINGXP_009601217.17e-74(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.15e-09NAC family protein