PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01007g00024.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 265aa    MW: 30423.9 Da    PI: 4.6974
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01007g00024.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.34.5e-2111353128
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksg 81 
                               +GfrFhP+d e++ +yL   v++++l+l++  ++ +d+y   ePw++ +++k+    +++  y  ++ +k +a +k+ +r++ +g
  Peaxi162Scf01007g00024.1   1 MGFRFHPKDIEVM-QYLLGFVTNNPLPLQNElMQFADLYADkEPWQIFQACKShdciNKNTRYIITQLKKVKADKKNVSRTVGKG 84 
                               5**********99.9**********99977757777*997559****754444334455677*********************** PP

                       NAM  82 yWkatgkdkevlskkgelvglkktLvfy....kgrapkgektdWvmheyrl 128
                               +Wk + + kev +++g+lvg  k++ +y    + ++ + ++ +W+m ey+l
  Peaxi162Scf01007g00024.1  85 TWKPQDRGKEVRDTSGRLVGFVKSIKYYpskkSSSTDNNNNGEWLMREYSL 135
                               ****************************765434555667999******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100526.4561158IPR003441NAC domain
SuperFamilySSF1019416.41E-252158IPR003441NAC domain
PfamPF023652.9E-122135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MGFRFHPKDI EVMQYLLGFV TNNPLPLQNE LMQFADLYAD KEPWQIFQAC KSHDCINKNT  60
RYIITQLKKV KADKKNVSRT VGKGTWKPQD RGKEVRDTSG RLVGFVKSIK YYPSKKSSST  120
DNNNNGEWLM REYSLADNYL NAPQIKNKGF VICRIKKKEK KGDNNEEVND DGDVEDDVQE  180
YINSVLQEDH VQEDVNGQSN DTVLLADHIE ENNNNEFYMI DGENIGVSAL LGSADQVQVQ  240
NQDHQFPLMW SSPDDIDLDT ISYCL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019238684.13e-81PREDICTED: NAC domain-containing protein 30-like
TrEMBLA0A1S4AKD42e-73A0A1S4AKD4_TOBAC; NAC domain-containing protein 30-like
STRINGXP_009601217.17e-78(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-12NAC domain containing protein 2