PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01002g00120.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 317aa    MW: 35655.1 Da    PI: 4.8674
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01002g00120.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.63.4e-164695255
                              HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                              r +h+e E+rRR +iN++f+ Lr+l+P++    ++K + a+ L ++++YI+ Lq
  Peaxi162Scf01002g00120.1 46 RSKHSETEQRRRIKINERFQALRDLIPEN----DQKRDRASFLLEVIQYIQFLQ 95
                              899*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.14E-1843121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.2E-2243116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.6724494IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.49E-154699No hitNo description
PfamPF000108.9E-144695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-1250100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MVRTVKTHHE EVEEEDEEFS SRTPDDSSHK GKLEGKSNNG KGNSHRSKHS ETEQRRRIKI  60
NERFQALRDL IPENDQKRDR ASFLLEVIQY IQFLQEKLQM YEGTYQGWSA EPSKLMPWRS  120
TSGPVEGFAE QSQIVRNGST HEDNIVINPT LLASAQNSVD PNSTVAALYR VTDDPHMAAN  180
EAMAFNMPLQ SNLFENESVQ PSQSSPDAEH CNSQLQSLYW PGKQDVIDSD VPSYGRNDQE  240
EVRVDGEEAG ISNVYSQRLL NTLNQTLASM GVDMSQANVR VQLDVGKSPS SGTTATTLSR  300
EDNCDHMHKR LRTEGST
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019239141.10.0PREDICTED: transcription factor BIM2-like
RefseqXP_019239142.10.0PREDICTED: transcription factor BIM2-like
TrEMBLA0A1J6JU410.0A0A1J6JU41_NICAT; Transcription factor bim2
STRINGXP_009594724.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA89471821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-48BES1-interacting Myc-like protein 2