PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00999g00317.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

GeBP

Protein Properties

Length: 335aa MW: 38077.9 Da PI: 5.9829

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00999g00317.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	47.1	6.8e-15	126	214	7	97
DUF573 7 wseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk...vsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 w+++Dei +L+ li+ ka+t++++ ++ ++y+++k + + ++ ++l +K+r L++K+k+ vkk ++++s++++ + Peaxi162Scf00999g00317.1 126 WTKDDEIFILKELINRKAETKTKSIKNYGEVYDYAKAFLCHRgvlFTVTDLKNKVRCLREKYKRSVKK-----KKTLSSPDEIEL 205 ***********************************9975433399****************9.....77899*** PP DUF573 89 felskkiWg 97 f+ls+ +Wg Peaxi162Scf00999g00317.1 206 FNLSEELWG 214 ******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	1.3E-13	126	214	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence Send to blast
MELDHGDDFV PDSIENEERS NEDGIDEQTV NSIEELEGLA SIENNRKSLS AVKMLLYAET 60 PSTTDDDAGS SDIQNKVPPK QSEPSIRKKL IFTKPSLPEL GGPYPHSEVL PKKTNGEGLV 120 KKYVEWTKDD EIFILKELIN RKAETKTKSI KNYGEVYDYA KAFLCHRGVL FTVTDLKNKV 180 RCLREKYKRS VKKKKTLSSP DEIELFNLSE ELWGCVNKDH KTNEQLARQS TSSLRHYERL 240 DPQGADKVLV GELGMAFKAM INSRYNDKQV VQEQVKSLLG SVDTRKHYAR QLLEVLKSSE 300 KADLSEEEEQ KIARSNSDLK IQHAQLVSDA YNALL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13760	7	8