PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00987g00110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | NAC | ||||||||
Protein Properties | Length: 287aa MW: 32829.1 Da PI: 6.5121 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.6 | 1.5e-50 | 10 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lppGfrF P+deelv++yL kk++++++ + evd++++ePw+Lp+ +k +++ewyfFs rd+kyatg r+nrat+sgyWka Peaxi162Scf00987g00110.1 10 LPPGFRFFPSDEELVCHYLYKKIANEEVLK-GSLVEVDLHTCEPWQLPEVAKLNSNEWYFFSFRDRKYATGFRTNRATTSGYWKA 93 79************************9655.67***************88888999***************************** PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 tgkd++v++ +g ++g++ktLvfyk+rap+g kt W+mhe+rle Peaxi162Scf00987g00110.1 94 TGKDRTVVDPrTGVVIGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 138 ********9867888***************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.79E-62 | 8 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 58.108 | 10 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.0E-27 | 11 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence Send to blast |
MGLRDIGASL PPGFRFFPSD EELVCHYLYK KIANEEVLKG SLVEVDLHTC EPWQLPEVAK 60 LNSNEWYFFS FRDRKYATGF RTNRATTSGY WKATGKDRTV VDPRTGVVIG MRKTLVFYKN 120 RAPNGIKTGW IMHEFRLENP HIPPKEDWVL CRVFHKGKDG NNVSNNLRPE NMYETSVTSA 180 ELVVSPLNME NHATLPKLLP YADGYRPTAP AFFHSPTHHS QNSSNFQLSQ EINKVLANEM 240 AQSKYGKEDE FGFLYDMNFE DTGLQDGGLH SCLGDMKFED ENSLVFI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-47 | 1 | 156 | 1 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009624737.1 | 1e-177 | PREDICTED: NAC domain-containing protein 21/22-like | ||||
TrEMBL | A0A1S4BKT8 | 1e-175 | A0A1S4BKT8_TOBAC; NAC domain-containing protein 21/22-like | ||||
STRING | XP_009624737.1 | 1e-177 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1882 | 24 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 7e-94 | NAC domain containing protein 74 |